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scnpilot_p_inoc_scaffold_7007_1

Organism: SCNpilot_P_inoc_Hydrogenophaga_70_12

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(3..551)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S1 n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MNQ8_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 183.0
  • Bit_score: 351
  • Evalue 4.10e-94
30S ribosomal protein S1 {ECO:0000256|PIRNR:PIRNR002111}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 183.0
  • Bit_score: 351
  • Evalue 5.80e-94
rpsA; ribosomal protein S1 similarity KEGG
DB: KEGG
  • Identity: 91.8
  • Coverage: 183.0
  • Bit_score: 333
  • Evalue 3.30e-89

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 549
ATGTCTGAATCTTTTGCCGCCCTCTTTGAAGAGTCCCTCAAGCGCGCCGAAATGCGCGCGGGCGAAGTCATCACCGCCGAGGTCGTTCGCATCGAACACAACCACGTGGTGGTCAACGCCGGTCTGAAGTCGGAAGCCTACGTCCCGCTGTCCGAATTCAAGAACGACCAAGGCGAACTCGAAGTGCAGGTCGGCGACTTCGTGTCCGTCGCCATCGACTCCGTCGAGAACGGCTTCGGCGACACCCTGCTGTCGCGCGACAAGGCCAAGCGCCTGGCCTCGTGGATGGCCCTGGAAAAGGCCCTGGAGTCGGGCGAATTCGTCACCGGCACCACCACCAGCAAGGTCAAGGGCGGCCTCAAGGTCATGGTCAACGGCATCAGCGCCTTCCTGCCGGGCTCGCTGGTCGACAGCCGTCCCACCAAGGACCTCACCCCCTACGAGAACAAGACCCTGGAATTCAAGGTCATCAAGCTCGACCGCAAGCGCAACAACGTGGTGCTGAGCCGCCGCGCCGTGGTGGAAGCCTCCATGGGCGAAGAGCGCGCC
PROTEIN sequence
Length: 183
MSESFAALFEESLKRAEMRAGEVITAEVVRIEHNHVVVNAGLKSEAYVPLSEFKNDQGELEVQVGDFVSVAIDSVENGFGDTLLSRDKAKRLASWMALEKALESGEFVTGTTTSKVKGGLKVMVNGISAFLPGSLVDSRPTKDLTPYENKTLEFKVIKLDRKRNNVVLSRRAVVEASMGEERA