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scnpilot_p_inoc_scaffold_8571_6

Organism: SCNpilot_P_inoc_Hydrogenophaga_70_12

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: 4825..5115

Top 3 Functional Annotations

Value Algorithm Source
Putative RNA-binding protein rbpB n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MPK7_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 94.8
  • Coverage: 97.0
  • Bit_score: 178
  • Evalue 2.50e-42
Putative RNA-binding protein rbpB {ECO:0000313|EMBL:EIK91147.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogen similarity UNIPROT
DB: UniProtKB
  • Identity: 94.8
  • Coverage: 97.0
  • Bit_score: 178
  • Evalue 3.50e-42
RNP-1-like RNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 69.5
  • Coverage: 95.0
  • Bit_score: 132
  • Evalue 7.60e-29

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 291
ATGAGCAGCAAACTGTACGTGGGCAACCTGCCCTACTCCGTCAACGACGATTCGCTTCGTCACAACTTCTCCGAATACGGTGCCGTGGCCTCGGCCAAGGTCATGACCGACCGCGACAGCGGCCGCTCCAAGGGTTTCGGTTTCGTCGAGATGTCCTCCGAGGCCGAGGCGCAAGCCGCCATCAACGGCCTCAATGGCCAGTCGGTGGACGGCCGCCAGATCGTGGTGAACATCTCGCGCCCCAAAGAAGGCGGCGGCGGTGGCTACCGCAGCAACGGTCCGCGCTACTAA
PROTEIN sequence
Length: 97
MSSKLYVGNLPYSVNDDSLRHNFSEYGAVASAKVMTDRDSGRSKGFGFVEMSSEAEAQAAINGLNGQSVDGRQIVVNISRPKEGGGGGYRSNGPRY*