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scnpilot_p_inoc_scaffold_9276_3

Organism: SCNpilot_P_inoc_Hydrogenophaga_70_12

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(1960..2892)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MKQ8_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 88.3
  • Coverage: 308.0
  • Bit_score: 573
  • Evalue 1.10e-160
  • rbh
Pseudouridine synthase {ECO:0000313|EMBL:EIK89798.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. similarity UNIPROT
DB: UniProtKB
  • Identity: 88.3
  • Coverage: 308.0
  • Bit_score: 573
  • Evalue 1.60e-160
pseudouridylate synthase, 23S RNA-specific similarity KEGG
DB: KEGG
  • Identity: 59.0
  • Coverage: 312.0
  • Bit_score: 376
  • Evalue 5.70e-102

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 933
ATGGCGCACCGCCCCAAGAACCCCCTGATTCCCACGCGCGAGGGCGTGTCGCCCAGCTGCGTGGCCATTCCCTTCACCCAACCGGCGCCCTGGGCCTCGGTGCTGCAGTTCCTGAGCGAGCGCCTGCCGGTGATCGCCCCCGGCGAATGGGCGCGGCGCCTGGCGCGCGGCGAGGTGCTGGACGACCACGGCCAGGCCCTGGCGCCCGAAGCCCCCTGCGAGCCCGGCGCCCGGCTCTACTACTGGCGCCATGTCGAGGACGAAGCGGAGATTCCCTTCGAGCCCCAGATCCTGTTCCACGACGAGCACCTGCTGGTGGCCGACAAGCCGCACTTCATGCCCGTCACGCCCAGCGGGCGCTATGTGCGGCACAGCCTGATGGTGCGGCTCAAGCAGCGCACAGGCCTCGACTCGCTCAACCCCATCCACCGCATCGACCGCGAAACCGCCGGCCTGGTGGTGTTCAACCTCCGGCCGCAGGACCGCAACGCCTACCACGCGCTGTTCCGCGAGCGCGCGGTCGACAAGGCCTACGAAGCCATCGCGCCGCACGACCCCACGCTCGCGCTGCCCCTCACCCGCCGCAGCCGCATCGAAGAGGACGTGGAGGCCTTCTTCCGCATGGTGGAGGCCGAGGGCGAGCCCAACAGCGAGACGCGCGTCGAGCGCCTGGAGGTGCGCGGCGCCTGGGCCCGCTATGGCCTGGCACCGCTCACCGGCAAGCGCCACCAGCTGCGCGTGCACCTCGACGCCCTGGGCCTGCCCATTGCGGGCGACCAGTTCTACCCGCGCGTGCGGCGCGGCCCCGACGGGGTCGAAGATTTCACCGAACCCTTGCGGCTGCTGGCGAGCGCCATCGCTTTCACCGACCCGGTGACGGGCCAGGCCCGGCGCTTCGAGAGCGCGCGCACGCTGGACTGGCCCTTGCCCTGA
PROTEIN sequence
Length: 311
MAHRPKNPLIPTREGVSPSCVAIPFTQPAPWASVLQFLSERLPVIAPGEWARRLARGEVLDDHGQALAPEAPCEPGARLYYWRHVEDEAEIPFEPQILFHDEHLLVADKPHFMPVTPSGRYVRHSLMVRLKQRTGLDSLNPIHRIDRETAGLVVFNLRPQDRNAYHALFRERAVDKAYEAIAPHDPTLALPLTRRSRIEEDVEAFFRMVEAEGEPNSETRVERLEVRGAWARYGLAPLTGKRHQLRVHLDALGLPIAGDQFYPRVRRGPDGVEDFTEPLRLLASAIAFTDPVTGQARRFESARTLDWPLP*