ggKbase home page

scnpilot_p_inoc_scaffold_11004_1

Organism: SCNpilot_P_inoc_Hydrogenophaga_70_12

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(171..758)

Top 3 Functional Annotations

Value Algorithm Source
Oligoribonuclease {ECO:0000256|HAMAP-Rule:MF_00045}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00045};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; similarity UNIPROT
DB: UniProtKB
  • Identity: 91.8
  • Coverage: 195.0
  • Bit_score: 370
  • Evalue 1.70e-99
Oligoribonuclease n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MNB7_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 91.8
  • Coverage: 195.0
  • Bit_score: 370
  • Evalue 1.20e-99
  • rbh
Exonuclease RNase T and DNA polymerase III similarity KEGG
DB: KEGG
  • Identity: 76.7
  • Coverage: 193.0
  • Bit_score: 315
  • Evalue 1.30e-83

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 588
ATGACCTCCAATCCCGCCGACATCGCCGCCCCCGAAGTGCCCACGCTCGCCAAGAGTGACCAGAACCTGGTCTGGATCGACTGCGAAATGAGCGGTCTCGATCCCGAGAAGGAGCGCCTGCTGGAGATCGCGGTGGTGGTGACCGGCCCGCAGCTCACGCCGCGCATCGAAGGCCCCGTCATCGTGGTCCACCAGAGCGATGAGCTGCTCAACGCCATGGATGCCTGGAACAAGGGCACGCACGGCCGCAGCGGTCTCATCGACAAGGTGCGCGCCAGCACGGTGAGCGAGGCCGAGGCCGAGCAGCAGCTCATCGACTTCATCTCGCGCTACGTGCCGAAGAACAGCGCACCCCTGTGTGGCAACACCATCGGCCAGGACCGCCGCTTCCTGGTGAAGTACATGCCCCGGCTCGAGGCCTACCTGCACTACCGCAACGTCGATGTGAGCACCTTGAAGGAACTGGCCAAGCGCTGGCGCCCCGAAGTGGTCGACGCCTTCAAGAAGCGCCAGCTGCACACCGCCCTGGCCGACGTGCACGAATCCATTGACGAACTCGAGCACTACCGCGCGCGGTTTCTGCGCTGA
PROTEIN sequence
Length: 196
MTSNPADIAAPEVPTLAKSDQNLVWIDCEMSGLDPEKERLLEIAVVVTGPQLTPRIEGPVIVVHQSDELLNAMDAWNKGTHGRSGLIDKVRASTVSEAEAEQQLIDFISRYVPKNSAPLCGNTIGQDRRFLVKYMPRLEAYLHYRNVDVSTLKELAKRWRPEVVDAFKKRQLHTALADVHESIDELEHYRARFLR*