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scnpilot_p_inoc_scaffold_13969_5

Organism: SCNpilot_P_inoc_Hydrogenophaga_70_12

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(3381..3686)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0002F768E9 similarity UNIREF
DB: UNIREF100
  • Identity: 58.3
  • Coverage: 96.0
  • Bit_score: 129
  • Evalue 2.40e-27
transcriptional regulator, LysR family similarity KEGG
DB: KEGG
  • Identity: 42.4
  • Coverage: 92.0
  • Bit_score: 92
  • Evalue 7.00e-17
Transcriptional regulator, LysR family {ECO:0000313|EMBL:AGU50524.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variov similarity UNIPROT
DB: UniProtKB
  • Identity: 42.4
  • Coverage: 92.0
  • Bit_score: 92
  • Evalue 3.50e-16

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 306
ATGTACAACGCGCAGATCGAGCAGGCGCTCGAGCGCGCGGGCCGCCCCCGGCGCACGGTGATGTCCAAGCCCACCTTCCTGGGCATTCCCTTCATCATCGAGCAGACCGACCTGATCGCTACCGTGCCCGAGAAGGTCGCCAAGGGGTTCACCCAGTTCACCGACATCGAGATCTTCGAGCCGCCGCTGGACCTGGAGCCGTTCGGGGTCGTGCTGCTGTGGCACGACCGCACACACAACAACCCCCTGCAACGCTGGTTCCGCGAACTGGTGATCGAGCTCTTCCAGGACCCCGAGCACCCCTGA
PROTEIN sequence
Length: 102
MYNAQIEQALERAGRPRRTVMSKPTFLGIPFIIEQTDLIATVPEKVAKGFTQFTDIEIFEPPLDLEPFGVVLLWHDRTHNNPLQRWFRELVIELFQDPEHP*