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scnpilot_p_inoc_scaffold_11994_10

Organism: SCNpilot_P_inoc_Hydrogenophaga_70_12

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(6362..6658)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S20 n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MLR6_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 99.0
  • Coverage: 98.0
  • Bit_score: 186
  • Evalue 1.60e-44
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenopha similarity UNIPROT
DB: UniProtKB
  • Identity: 99.0
  • Coverage: 98.0
  • Bit_score: 186
  • Evalue 2.20e-44
rpsT; 30S ribosomal protein S20 similarity KEGG
DB: KEGG
  • Identity: 90.9
  • Coverage: 99.0
  • Bit_score: 172
  • Evalue 6.80e-41

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 297
ATGGCCACCAAGCCGAAGAAAAAGAACCCCCGCCTGGCGTCGGGCCGCAAGCGCGCGCGCCAGGACGTCAAGCTCAACGCCGCCAACAGCTCGCTGCGCTCGAAGTACCGCACCGCGGTGAAGAACGTCGAGAAGGCCGTCGTCGCCGGCGACAAGGCCAAGGCCACCGAGCTGTTCGCCAAGATGCAGGCCGTTGTCGACACCATCGCCGACAAGGGTATCTTCCACAAGAACAAGGCCGCTCGCGACAAGAGCCGCCTGTCCGCGAAGGTCAAGGGCCTGGCCGCCGCGGCCTGA
PROTEIN sequence
Length: 99
MATKPKKKNPRLASGRKRARQDVKLNAANSSLRSKYRTAVKNVEKAVVAGDKAKATELFAKMQAVVDTIADKGIFHKNKAARDKSRLSAKVKGLAAAA*