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scnpilot_p_inoc_scaffold_14207_1

Organism: SCNpilot_P_inoc_Hydrogenophaga_70_12

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(3..1154)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=795665 species="Bacteria; Proteobacteria; Beta similarity UNIPROT
DB: UniProtKB
  • Identity: 98.4
  • Coverage: 384.0
  • Bit_score: 759
  • Evalue 1.90e-216
ribonuclease R (EC:3.1.13.1) similarity KEGG
DB: KEGG
  • Identity: 86.5
  • Coverage: 384.0
  • Bit_score: 673
  • Evalue 3.70e-191
Ribonuclease R n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MNZ5_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 98.2
  • Coverage: 384.0
  • Bit_score: 758
  • Evalue 3.10e-216

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1152
GTGGTCCGCGACGACGGCCAGCCCGACATCTACCTTCCCTCCAACGAAATGCGCGCGGTGCTGCACAAGGACCGCGTGAAGGCCCGCATCGTGCGGCTCGACCGCAAGGGCCGTCCCGAGGGCCGCGTCACCGAAATCATCGAGCGCTCCACGGCGCCCATCATCGGCCGCCTGTTGCAAGAGGGCGGCGTGTGGCTCGTGGCGCCAGAAGACAAGCGCTACGGCCAGGACGTGCTGATTCCCAAGGGTGCCACGGGCTCGGCCAAGCCGGGCCAGGTGGTGGTGGTGGAGCTCACCGAGCCGCCCGCGCTGTACGGGCAGCCCGTGGGGCGTGTGAAGGAAGTGCTCGGCGAGATCGACGACCCGGGCATGGAGATCGAGATCGCGGTCCGAAAGTACGGCGTGCCGCACGAGTTCTCGCAGACCGCCATGGCGCAGGCGCGCGCCTTGCCCGATCACGTGCGGCCGAGCGATCTGCGCCACCGGGTGGACCTGCGCGACGTGCCGCTGGTGACCATCGATGGCGAAGACGCGCGCGACTTCGACGACGCCGTGTACTGCGAGCCCGCGAAAGTGGGCAAGGCCAAGGGCTGGCGCCTGCTGGTGGCCATTGCCGACGTGAGCCACTACGTGCAGACCGGTTCGCCCATCGACGTGGACGCCTACGACCGCGCGACCTCGGTCTACTTCCCGCGCCGCGTGATCCCCATGCTGCCAGAGAAGCTGTCCAACGGCCTGTGCTCGCTCAACCCCGGGGTGGAGCGCCTGTGCATGGTGTGCGACATGCTCATCACCGCGCGCGGCGAGATCCACGCCTACCAGTTCTACCCGGCGGTGATGTTCAGCCACGCGCGCCTCACCTACACCGAGGTGGCGGCGATCCTGCAGAACACGCGCGGCCCCGAGGCCATGAACCGCAAGCCGCTGGTGCCGTACCTGCTGAACCTGCACGACGTGTACCGCGCGTTGCTGGCGGCGCGCAACGCGCGCGGGGCGGTGGACTTCGAGACCGTGGAGACGCAGATCGTCTGCGACGAATCGGGCCGCATCGAGCGCATCGTGCCGCGCACGCGCAACGACGCGCACAAGCTGATCGAAGAAGCCATGCTGGCCGCCAACGTCTGCTCGGCCGAGTTCATCGAGCAGGGCAAG
PROTEIN sequence
Length: 384
VVRDDGQPDIYLPSNEMRAVLHKDRVKARIVRLDRKGRPEGRVTEIIERSTAPIIGRLLQEGGVWLVAPEDKRYGQDVLIPKGATGSAKPGQVVVVELTEPPALYGQPVGRVKEVLGEIDDPGMEIEIAVRKYGVPHEFSQTAMAQARALPDHVRPSDLRHRVDLRDVPLVTIDGEDARDFDDAVYCEPAKVGKAKGWRLLVAIADVSHYVQTGSPIDVDAYDRATSVYFPRRVIPMLPEKLSNGLCSLNPGVERLCMVCDMLITARGEIHAYQFYPAVMFSHARLTYTEVAAILQNTRGPEAMNRKPLVPYLLNLHDVYRALLAARNARGAVDFETVETQIVCDESGRIERIVPRTRNDAHKLIEEAMLAANVCSAEFIEQGK