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scnpilot_p_inoc_scaffold_14538_3

Organism: SCNpilot_P_inoc_Hydrogenophaga_70_12

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(1596..1958)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L20 n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MNX6_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 120.0
  • Bit_score: 235
  • Evalue 2.80e-59
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydroge similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 120.0
  • Bit_score: 235
  • Evalue 4.00e-59
rplT; 50S ribosomal protein L20 similarity KEGG
DB: KEGG
  • Identity: 93.3
  • Coverage: 119.0
  • Bit_score: 215
  • Evalue 6.50e-54

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 363
ATGCCTCGCGTCAAACGTGGTGTCACGGCTCGCGCCCGCCATAAAAAAGTCCTGGCTCTGGCCAAAGGTTTCCGCGGCCGCCGCGGCAACGTCTTCCGCATCGCCAAACAGGCGGTGATGAAGGCGGGCCAGTACGCCTACCGCGATCGCCGCACCAAGAAGCGCGTGTTCCGCCAGCTGTGGATCGCGCGTATCAACGCCGGTGCGCGCGCTTGCGGCCTGACGTACAGCCAGTTCGCCAACGGTCTGAAGAAGGCCCAGATCGAGATCGACCGCAAGGTCCTCGCCGACCTGGCCGTCAACGACCCGGCGGCTTTTGGCAGCATCGTGGAGCAGGTCAAAGCCAAGCTGGCCACCGCTTGA
PROTEIN sequence
Length: 121
MPRVKRGVTARARHKKVLALAKGFRGRRGNVFRIAKQAVMKAGQYAYRDRRTKKRVFRQLWIARINAGARACGLTYSQFANGLKKAQIEIDRKVLADLAVNDPAAFGSIVEQVKAKLATA*