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scnpilot_p_inoc_scaffold_16187_1

Organism: SCNpilot_P_inoc_Hydrogenophaga_70_12

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(1..1929)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MUE0_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 94.7
  • Coverage: 645.0
  • Bit_score: 1182
  • Evalue 0.0
  • rbh
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Com similarity UNIPROT
DB: UniProtKB
  • Identity: 94.7
  • Coverage: 645.0
  • Bit_score: 1182
  • Evalue 0.0
RNA polymerase, sigma 70 subunit, RpoD similarity KEGG
DB: KEGG
  • Identity: 76.5
  • Coverage: 650.0
  • Bit_score: 933
  • Evalue 2.50e-269

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1929
ATGCCCGCGAAGAAAGCCAGTCCGTCCGCTGCCGCCACCAAGACCGCCGCCAAGAAGGCCGCTCCGGCCAAAGCCCAACCGGTGGCCGCTCCCAAGAAAGCCCCCGCAGTGACGACCAAGACCACCCCCACCAAAGCCGCCGCCAAGGCCGCGCCAGCCAAGAAGGCTGCCGCCAAGACGACCGCCAGCAGCACCGCGAAAAAATCCAAGCCCGAGGCCCTGGCCGAGGAGTTGCTGGAAGGCGAAGCCCCCGCCAAGAAGAAACCTGGCCGTCCCGCCAAGGCTGCGGCCGACAAGCCCGCCGCCAAGCGCGGCCGCAAGCCCAAGGCCGACGCCAAGGGCAAGGGCGAGGACGATCTCGACGACGCCGACCTCGGTGACATCGACGAGGACCTGGTCGGCGACGACGTGCCCGAAGAGGCCAGCACCGAGGAAGCGCAGCCGGTCGAAAAGGCCAAGCCGCTGCGCATGAAGATCAGCAAGGCCAAGGAGCGTGCGCTGATGAAGGAATTCGGGCTGGACGAGACCGTCCTGTCCGAGGAGGAGGCGCGCGCCCGTCGCGAGCGTCTCAAGACCCTGATCAAGCTGGGCAAGACGCGCGGCTACCTCACGCACGGCGAGATCAACGACCACCTGCCCGACAAGCTGGTCGAGGCCGAGACCCTGGAAGTGGTGGTCTCGCTGCTCAACGACATGGGTGTGGCCGTCTACGAACAGACGCCCGATGCCGAGACCCTGCTGCTCAACAACACCGGCCCCACCGCCGCCACCGAAGAAGAGGCGGAAGAGGAAGCCGAAGCCGCCCTGTCCACGGTGGACAGCGAATTCGGTCGCACCACCGACCCGGTGCGCATGTACATGCGCGAAATGGGCACGGTGGAGCTGCTCACGCGCGAGGGCGAGATCGAGATCGCCAAGCGCATCGAAGGCGGCCTGCACAGCATGATGGAAGCGATCAGCGAATCGCCCGCCACCATCGCCGAGATCCTGGCCATGGCCGAGGAAATCCGCGAAGGCAAGGTCGTCATCTCCACCGTGGTGGACGGTTTCGCCGACGCCGACGAGGCCGACGACTACGTTGCCGAGGAAGACTTCGACGACTACGACGAGGCCGACGACGACGACGGCAAGGGCGGCTCCAAGGCCCTCACGCGCAAGCTCGAGGAACTCAAGCGCGAGGCGCTGGAGCGCTTCGACGCCATGCGCGGCATGTTCGAGAAGCTGCACAAGATCTACGACAAGGAAGGCTACGGCAGCCCCCACTACGCCAAGACGCAGCAGGCCATCACCGAGAAGCTGATGACCATCCGCTTCACGGCCAAGGCGATCGAGAAGCTGTGCAGCACGGTGCGCGGCCAGGTCGACGAGATCCGCAAGAAGGAGCGCGAACTGCGCCGCATCATCGTGGACAAGTGCGGCATGCCACAGGAGACCTTCATCAAGGACTTCCCGCCCAACCTGCTCAACCTCAAGTGGGTGGAGAAGCAGGCCGCCGCGGGCAAGCCCTGGAGCACGGTGCTCGAGCGCAACATCCCGCCGGTGCAGGAGCTGCAGCAGGGCCTGATCGACATCCAGAGCAGCGTGGTGGTGCCCATCGAGCACCTCAAGGACATCCACAAGCGGATGAACAACGGCGAGGCCTCCTCGCGCGACGCCAAGAAGGAAATGATCGAGGCCAACCTGCGCCTGGTGATCTCCATCGCGAAGAAGTACACCAACCGCGGCCTGCAGTTCCTGGACCTGATCCAGGAAGGCAACATCGGCCTCATGAAGGCGGTGGACAAGTTCGAATACCGCCGCGGCTACAAGTTCTCGACCTACGCCACCTGGTGGATCCGCCAGGCCATCACGCGCTCGATCGCCGACCAGGCGCGCACCATCCGCATCCCGGTGCACATGATCGAGACCATCAACAAGATGAACCGCATC
PROTEIN sequence
Length: 643
MPAKKASPSAAATKTAAKKAAPAKAQPVAAPKKAPAVTTKTTPTKAAAKAAPAKKAAAKTTASSTAKKSKPEALAEELLEGEAPAKKKPGRPAKAAADKPAAKRGRKPKADAKGKGEDDLDDADLGDIDEDLVGDDVPEEASTEEAQPVEKAKPLRMKISKAKERALMKEFGLDETVLSEEEARARRERLKTLIKLGKTRGYLTHGEINDHLPDKLVEAETLEVVVSLLNDMGVAVYEQTPDAETLLLNNTGPTAATEEEAEEEAEAALSTVDSEFGRTTDPVRMYMREMGTVELLTREGEIEIAKRIEGGLHSMMEAISESPATIAEILAMAEEIREGKVVISTVVDGFADADEADDYVAEEDFDDYDEADDDDGKGGSKALTRKLEELKREALERFDAMRGMFEKLHKIYDKEGYGSPHYAKTQQAITEKLMTIRFTAKAIEKLCSTVRGQVDEIRKKERELRRIIVDKCGMPQETFIKDFPPNLLNLKWVEKQAAAGKPWSTVLERNIPPVQELQQGLIDIQSSVVVPIEHLKDIHKRMNNGEASSRDAKKEMIEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKMNRI