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scnpilot_p_inoc_scaffold_18323_4

Organism: SCNpilot_P_inoc_Hydrogenophaga_70_12

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(2214..3014)

Top 3 Functional Annotations

Value Algorithm Source
Type II and III secretion system protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MRN8_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 97.4
  • Coverage: 266.0
  • Bit_score: 504
  • Evalue 7.20e-140
Type II and III secretion system protein {ECO:0000313|EMBL:EIK91878.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="H similarity UNIPROT
DB: UniProtKB
  • Identity: 97.4
  • Coverage: 266.0
  • Bit_score: 504
  • Evalue 1.00e-139
pilQ; type IV pilus assembly protein PilQ similarity KEGG
DB: KEGG
  • Identity: 66.1
  • Coverage: 274.0
  • Bit_score: 337
  • Evalue 3.30e-90

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 801
CTGATCACCAAGCTCGATATCCCGATCCGCCAGGTGCTGATCGAGGCGCGCATCGTGGAAGCCGACGACGACTTCAGCAAATCCATCGGCGTGCGTCTGGGCGGTGGCGTGCGGGACTTCAGCGCAGGCTCGGCCAATGGCAACCCGGTGCGCGGCAACTTCGGCAGCAACTACGGGGCCGTGACCACCGGACCGTCTCTGACCTCCGCCCCCTTCGTGAACCTGCCCGCCTTGCCCCCGTCCGGTCAGGCCGCGTCCTACGCCCTGTCGCTGTTCAGCCCGAACGCCTCGCGCTTCCTGGCGCTGGAAATCTCGGCGCTGGAATCCGATGGCAAGGGCCGCGTGGTGTCCAGTCCTCGCGTGGTCACGGCCGACCAGGTGAAGGCGCTGATCGAGCAGGGCACCGAGTTCCCTTACCAGACCGCCACGTCCAGCGGCGCCACGGCCATCGCGTTCCGCAAGGCCAACCTCAAGCTGGAAGTTACGCCGCAGATCACGCCCGAGGGCAACATCATTCTCGACCTCGACGTGAACAAGGACACCCGTGGCGAAACCACCTCCGAGGGTATCGCCATCGACACCAAGCACGTGCAAACCCAGGTGCTGGTGGAGAACGGCGGCACGGTGGTGATCGGTGGCATCTTCGAGCGCACCGAGCGCAACCAGATCCAGAAGGTGCCGCTGCTGGGCGATCTGCCCGCCGTGGGCAACCTGTTCAAGTCGCGCAACCAGATCGATCAGCGTTCTGAGCTGCTGATCTTCATCACGCCGCGGGTCCTGGGGCGCACCGCCATCAACTAA
PROTEIN sequence
Length: 267
LITKLDIPIRQVLIEARIVEADDDFSKSIGVRLGGGVRDFSAGSANGNPVRGNFGSNYGAVTTGPSLTSAPFVNLPALPPSGQAASYALSLFSPNASRFLALEISALESDGKGRVVSSPRVVTADQVKALIEQGTEFPYQTATSSGATAIAFRKANLKLEVTPQITPEGNIILDLDVNKDTRGETTSEGIAIDTKHVQTQVLVENGGTVVIGGIFERTERNQIQKVPLLGDLPAVGNLFKSRNQIDQRSELLIFITPRVLGRTAIN*