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scnpilot_p_inoc_scaffold_2397_6

Organism: SCNpilot_P_inoc_Acidovorax_68_4_fragment

partial RP 24 / 55 BSCG 24 / 51 MC: 1 ASCG 5 / 38
Location: comp(5339..5887)

Top 3 Functional Annotations

Value Algorithm Source
transcription elongation factor GreB n=1 Tax=Acidovorax radicis RepID=UPI000237746F similarity UNIREF
DB: UNIREF100
  • Identity: 73.1
  • Coverage: 182.0
  • Bit_score: 269
  • Evalue 2.10e-69
Transcription elongation factor similarity KEGG
DB: KEGG
  • Identity: 72.1
  • Coverage: 183.0
  • Bit_score: 265
  • Evalue 1.40e-68
Transcription elongation factor GreB {ECO:0000256|HAMAP-Rule:MF_00930}; Transcript cleavage factor GreB {ECO:0000256|HAMAP-Rule:MF_00930}; TaxID=399795 species="Bacteria; Proteobacteria; Betaproteobac similarity UNIPROT
DB: UniProtKB
  • Identity: 72.1
  • Coverage: 183.0
  • Bit_score: 265
  • Evalue 4.10e-68

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Taxonomy

Comamonas testosteroni → Comamonas → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 549
ATGAGCAAGGCGTTTACCCGCGAAACCGACGAGGAGCCCGAAGACGCAGTGCCGCCGCCCGCCGCGGGGGGTGGCCGCAACTACATCACGGCCGCGGGGTACGCACGGCTGCGCGATGAGCTCCTGCAGTTAATGGACGTGGAGCGCCCGAAGGTGGTCGAGACCGTGCATTGGGCGGCCAAGAACGGCGACCGTTCGGAAAACGGCGACTATCTCTACGGCAAGAAGCGCCTGCGCGAGATCGATCGCCGCATCCGCTTCCTCACCGCACGCATGGAGGCAGCGGAGATCGTCGATCCATCCGTACACGCGGGAAGCGACCAAGTCTTTTTTGGCGCTACGGTGCGCTACATGGACGATCTGGGCGTCGAGGCCAAAGTCACTATCAAGGGAACCGACGAAGCCGTCGCCAGCCAAGGTGAAGTGAGTTGGATCTCGCCCGTCGCACGGGCGCTCCTCAAGGCGCGTGTCGGTGACGAAGTTCAGTTGGTCACGCCGTCCGGTACGCGGCGCCTGGAAATTCTGGACGTGCGCTATCCGCAGGCTTAG
PROTEIN sequence
Length: 183
MSKAFTRETDEEPEDAVPPPAAGGGRNYITAAGYARLRDELLQLMDVERPKVVETVHWAAKNGDRSENGDYLYGKKRLREIDRRIRFLTARMEAAEIVDPSVHAGSDQVFFGATVRYMDDLGVEAKVTIKGTDEAVASQGEVSWISPVARALLKARVGDEVQLVTPSGTRRLEILDVRYPQA*