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scnpilot_p_inoc_scaffold_3726_8

Organism: SCNpilot_P_inoc_Acidovorax_68_4_fragment

partial RP 24 / 55 BSCG 24 / 51 MC: 1 ASCG 5 / 38
Location: 4642..5937

Top 3 Functional Annotations

Value Algorithm Source
UPI0003D3E798 related cluster n=1 Tax=unknown RepID=UPI0003D3E798 similarity UNIREF
DB: UNIREF100
  • Identity: 54.5
  • Coverage: 424.0
  • Bit_score: 446
  • Evalue 2.20e-122
  • rbh
O-antigen polymerase {ECO:0000313|EMBL:GAD20476.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.5
  • Coverage: 424.0
  • Bit_score: 446
  • Evalue 3.10e-122
O-antigen polymerase similarity KEGG
DB: KEGG
  • Identity: 52.9
  • Coverage: 429.0
  • Bit_score: 434
  • Evalue 3.20e-119

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Taxonomy

Acidovorax sp. MR-S7 → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1296
TTGAAACTCCCTCTCGCGGTTGCGCAGCCCGCCTCCTGGCCGGAACAGCTCTCCACCGTGGCCGCTTTCGCCACGCCTGGTTTGGCCTTGTGGCTGCCTTCGGGTTATTCCTATGGCGCCGTGCTGCTGTTGCTCGGCGCCCTGCTCACGCTCCACCGCTGGCCGCGCCAGCCGCAGAGTGCCTGGACCTGGGCCTTTGCGGCCGCCATGTTGGCCATGGCCGTGCTCTGGGCGCTGCAGGCCGACCCCGCCGAAAGCTTTGGCCGCGCCGATCGCCCGGCCAAATACACCCTGGGCGCCATGTGCTTGTTGTACGTGACGGTATTTCCGCCACGCCCGAAGGCGCTGCTCGCCGGGCTGGTGGTGGGCACGGTGGGGGCTGGCGCCATTGCGGTCTGGCAAATGTATGGCCTGCATGCCGAGCGCGCCTGGGGCCATACCAATGCCATCCAGTACGGGAATCTCGCCCTGTGCATGGCCGCGATGCTGGCCCTGTATGCCGGCGCGGTGTGGGCGCACATGGCTTGGGCCCCGCGTGTGCTGTGCGTGCTTGGCGTGGCGGCGGGGCTGAACGCCTCGGTCCTGTCGCAGTCGCGGGGCGGATGGCTGGCCTTGCTCCTCGCGCTTCCGGTGCTGCTGGGCTGGCTGGCGCTGCACCAGCGGCGCGTCTTCAAGGTGGTGAGCCTCGGCGTGGTCGCGCTGGTGCTCCTGCTGTCGGTCGCCAACCGCGGTGTGCTGCAGGAGCGCTGGAAGCTCATGGAGCAGGAAGTCCAGGGCTACGAACAGCGCGGCGACGCGGGCAATTCGGTCGGTCAGCGCCTGGAGCATTGGCGTTTCGCCTGGGATATTGCGCGGGAGCGCCCGCTGCTGGGCTGGGGGTTCGCCGGTTACATGGCAGAAAAGGCGCGCCGCGCCAACGCCGGGCAATACCACCGCTCCATCGTCGAATACAAATTCGTGCACAACGAGTTCCTGGACCAGTGGGTCAAACTGGGGGTGGCAGGGCCGCTCGTGCTGCTGCTTTTCTATGCCCTGCCCATCGCCATGTTCGCCCCTTTGGCGTCGCGCATGCGGAACTACCGCTGTGACGCCGCCCTGGGCGCGCACGCGTTGGCGCTGCGCCTGTGCGGCACCTGCGTGCCCATTCTCTACGTCGGCTTCGGACTGACCCAGGTATTCTTTGCGCACAACAGCGGCATCATGTTCTACCTGTTCATGCTGATGCTGTGCTGGGCGGCATTGCACTCCCTGGAGCGCCAGCTGGCCAGCCTGCCCGTGGCGGAGGTGCTGGCATGA
PROTEIN sequence
Length: 432
LKLPLAVAQPASWPEQLSTVAAFATPGLALWLPSGYSYGAVLLLLGALLTLHRWPRQPQSAWTWAFAAAMLAMAVLWALQADPAESFGRADRPAKYTLGAMCLLYVTVFPPRPKALLAGLVVGTVGAGAIAVWQMYGLHAERAWGHTNAIQYGNLALCMAAMLALYAGAVWAHMAWAPRVLCVLGVAAGLNASVLSQSRGGWLALLLALPVLLGWLALHQRRVFKVVSLGVVALVLLLSVANRGVLQERWKLMEQEVQGYEQRGDAGNSVGQRLEHWRFAWDIARERPLLGWGFAGYMAEKARRANAGQYHRSIVEYKFVHNEFLDQWVKLGVAGPLVLLLFYALPIAMFAPLASRMRNYRCDAALGAHALALRLCGTCVPILYVGFGLTQVFFAHNSGIMFYLFMLMLCWAALHSLERQLASLPVAEVLA*