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scnpilot_p_inoc_scaffold_4938_6

Organism: SCNpilot_P_inoc_Acidovorax_68_4_fragment

partial RP 24 / 55 BSCG 24 / 51 MC: 1 ASCG 5 / 38
Location: comp(2151..2684)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L6 n=1 Tax=Acidovorax sp. KKS102 RepID=K0I9Z1_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 85.3
  • Coverage: 177.0
  • Bit_score: 299
  • Evalue 2.40e-78
rplF; 50S ribosomal protein L6 Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 86.4
  • Coverage: 177.0
  • Bit_score: 302
  • Evalue 5.10e-79
rplF; 50S ribosomal protein L6 similarity KEGG
DB: KEGG
  • Identity: 85.3
  • Coverage: 177.0
  • Bit_score: 299
  • Evalue 6.60e-79

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Taxonomy

R_Burkholderiales_64_960 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 534
ATGTCCCGAGTAGGAAAAATGCCGGTCACCATCCCCGCGGGTGTGGATGTATCGATCGCCAACGGCCTGATCAGCGTCAAAGGTTCGGGCGGCGCATTGTCGCTGGCCCAGAATGCCCTGGTCAACGTGGCCAGCCAGGATGGCAAGCTCCGCTTTGCGCCTGTGGATGAGAGTCGTGAAGCCAATGCCATGAGCGGTACCTTGCGCCAGCTCGTGAACAACATGGTGGTTGGCGTCAGCGCCGGGTTCGAGCGCAAGCTCAGCCTGGTCGGCGTGGGCTACAAGGCCCAAGCGTCCGGTTCGAAGCTGAATCTGTCGGTGGGTTACTCCCACCCCGTGAACAAGGAGATGCCCGATGGCATCACCGTCGCCACCCCGACCCCGACGGAAGTCGTGATCAAGGGTGCCGACCGCCAGCGCGTGGGACAGATCGCCGCCGAGATTCGTGCGATTCGTCCGCCTGAGCCCTACAAGGGCAAGGGCATCCGCTACGCGGACGAACGCGTCGTGATCAAAGAAACCAAGAAGAAGTAA
PROTEIN sequence
Length: 178
MSRVGKMPVTIPAGVDVSIANGLISVKGSGGALSLAQNALVNVASQDGKLRFAPVDESREANAMSGTLRQLVNNMVVGVSAGFERKLSLVGVGYKAQASGSKLNLSVGYSHPVNKEMPDGITVATPTPTEVVIKGADRQRVGQIAAEIRAIRPPEPYKGKGIRYADERVVIKETKKK*