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scnpilot_p_inoc_scaffold_4139_2

Organism: SCNpilot_P_inoc_Acidovorax_68_4_fragment

partial RP 24 / 55 BSCG 24 / 51 MC: 1 ASCG 5 / 38
Location: 1448..1909

Top 3 Functional Annotations

Value Algorithm Source
Small permease component of tripartite tricarboxylate transporter n=1 Tax=Janthinobacterium sp. (strain Marseille) RepID=A6SV64_JANMA similarity UNIREF
DB: UNIREF100
  • Identity: 58.2
  • Coverage: 153.0
  • Bit_score: 185
  • Evalue 5.60e-44
Tricarboxylate transport protein TctB similarity KEGG
DB: KEGG
  • Identity: 70.4
  • Coverage: 152.0
  • Bit_score: 225
  • Evalue 1.10e-56
Tricarboxylate transport protein TctB {ECO:0000313|EMBL:CDM25675.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Cas similarity UNIPROT
DB: UniProtKB
  • Identity: 70.4
  • Coverage: 152.0
  • Bit_score: 225
  • Evalue 5.20e-56

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Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 462
GTGTCTCGCTTCATCCGCCACCCCCGGGATTTCTGGTCCGGGGTCATGTTCATGTGTTTCGGCCTCGCGGCCGTGGTCATCGGCCAGGATTACCCCATGGGCACCGGGGGCCGCATGGGCGCGGCCTATTTCCCCGTCGTCCTGGGCGTGCTGCTCTCGCTGATCGGCCTGGCCACCACGCTGCGCTCGCTGCGCAAGCAGGGTGAGCGCATCGAAAACTTCTCCATCCGCGACACGGCGCTCGTCCTGGGCTCGGTCTTCCTGTTCGGCGCGCTCGTGCGCGGCGCCGGCCTGGTGGTCGCCGTCTCGGTGCTGCTGATGGGCAGCGCCTACGCCAGCGAGAAGTTCAACCTGAAGGTCTCGATCCTCATCACCATCGCCGCGGTCGTGTTCTGCGTGCTGGTGTTCGTCAAGGGCCTGGGCCTTCCCCTGCCCATCTTCGGCCCCTGGTTCGGCGCCTGA
PROTEIN sequence
Length: 154
VSRFIRHPRDFWSGVMFMCFGLAAVVIGQDYPMGTGGRMGAAYFPVVLGVLLSLIGLATTLRSLRKQGERIENFSIRDTALVLGSVFLFGALVRGAGLVVAVSVLLMGSAYASEKFNLKVSILITIAAVVFCVLVFVKGLGLPLPIFGPWFGA*