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scnpilot_p_inoc_scaffold_6190_3

Organism: SCNpilot_P_inoc_Acidovorax_68_4_fragment

partial RP 24 / 55 BSCG 24 / 51 MC: 1 ASCG 5 / 38
Location: 1578..2615

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, RND family n=1 Tax=Variovorax paradoxus B4 RepID=T1XL89_VARPD similarity UNIREF
DB: UNIREF100
  • Identity: 65.1
  • Coverage: 350.0
  • Bit_score: 426
  • Evalue 1.90e-116
  • rbh
efflux transporter, RND family Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 76.1
  • Coverage: 347.0
  • Bit_score: 489
  • Evalue 4.40e-135
efflux transporter, RND family similarity KEGG
DB: KEGG
  • Identity: 65.1
  • Coverage: 350.0
  • Bit_score: 426
  • Evalue 5.40e-117

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Taxonomy

RLO_Burkholderiales_65_40 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1038
ATGCTGAAAATCCACCCCCTCATGCAGGCCCTGGCGATGGCGCTGATCCTGACCGGAACGGCCAGCGCGGCGGATCTGCAGACCGCCCCGGCCCAGGCGGCGGCCCTGCAGGCCCGCACCAGCTTCGACGGCGTGGTCGAAGCCGTGCGCCAGACCGTGGTCGCCGCACAGACACCCGGCGCCGTGGTAGAACTCAAGGTGAAGGCGGGCGACCATGTCCAGGCCGGGCAGCTGCTGCTGCGCATCGACGCCCGCGCTGCCGACCAGAGTGCCGCCGCCAGCGACGCCCAGGTGCAGGCCGCCCGCGCCACGCTGGACGTGGCCACGCGCGAATACGAACGGCAAAAGCAGCTGTTCCAGAGGAAATACATCAGCCAGGCCGCGCTCGACCAGGCCGAATCGGGCTACAAAGCCGCCCGCGCCCAGGTCGCGGCGCAGGCGGCCCAGGCCGGTGCGGCGCGCACCGGGGCGGCGCTGAACACTGTGCGCGCACCCTACGCCGGCGTGGTGGCCGAGGTGCCCGTGCAACTGGGCGACATGGCCATGCCCGGCCGGACCCTGGTCTCGCTCTACGACCCCGGCAGCCTGCGCGTGACGGCCGCCGTGCCGCAGTCTCTGGCACCCCGCGTGCAGCAGGACGCCGTGCGCGTGGAACTGCCGGGTCTGCCGGCCGCGCAGCAATGGCCCGCCGCCGGGCGCGTGCAGGTACTGCCCACGGTCGATGCCGCGACGCACACCGTGCAGGTACGTGCAGAACTGCCCGGCAACGTGCAGGGGGTGGTACCCGGCATGTTTGCCCGCCTGTGGCTGCCCACCGCCGACAACAACGCACAAGCCAAAAGCGTGACGGTGCCGGTGTCCGCCATCGTGCGCCGCGCCGAGATGACGGGCCTGTATGTGCAGGACGCCCAGGGCAAGCCGTTGCTGCGCCAGGTGCGCCTGGGCCGTACCGACGGCGACCGTGTCGAAGTGCTGACGGGCGTGGCACCGGGCGAAGCCGTGGTGCTCGACCCGCAGTCGGCCACCCGCGCACGCTGA
PROTEIN sequence
Length: 346
MLKIHPLMQALAMALILTGTASAADLQTAPAQAAALQARTSFDGVVEAVRQTVVAAQTPGAVVELKVKAGDHVQAGQLLLRIDARAADQSAAASDAQVQAARATLDVATREYERQKQLFQRKYISQAALDQAESGYKAARAQVAAQAAQAGAARTGAALNTVRAPYAGVVAEVPVQLGDMAMPGRTLVSLYDPGSLRVTAAVPQSLAPRVQQDAVRVELPGLPAAQQWPAAGRVQVLPTVDAATHTVQVRAELPGNVQGVVPGMFARLWLPTADNNAQAKSVTVPVSAIVRRAEMTGLYVQDAQGKPLLRQVRLGRTDGDRVEVLTGVAPGEAVVLDPQSATRAR*