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scnpilot_p_inoc_scaffold_5361_10

Organism: SCNpilot_P_inoc_Acidovorax_68_4_fragment

partial RP 24 / 55 BSCG 24 / 51 MC: 1 ASCG 5 / 38
Location: comp(4150..4974)

Top 3 Functional Annotations

Value Algorithm Source
rplB; 50S ribosomal protein L2 id=12553582 bin=BDI species=Acidovorax sp. CF316 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 98.2
  • Coverage: 275.0
  • Bit_score: 552
  • Evalue 3.10e-154
  • rbh
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax tempera similarity UNIPROT
DB: UniProtKB
  • Identity: 96.4
  • Coverage: 274.0
  • Bit_score: 544
  • Evalue 1.20e-151
rplB; 50S ribosomal protein L2 similarity KEGG
DB: KEGG
  • Identity: 95.3
  • Coverage: 274.0
  • Bit_score: 540
  • Evalue 2.00e-151

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Taxonomy

Acidovorax temperans → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 825
ATGGCTGTCATCAAGATGAAACCCACCTCGCCCGGCCAGCGCGCCGTGGTGAAGGTCACGCGCGATCACCTACACAAGGGTGATGGCTACGCGCCGCTGCTGGAACCCCAGTTCCAGAAGGCCGGCCGCAACAACAACGGCCACATCACGACGCGCCACAAGGGCGGTGGTCACAAGCACCACTACCGCGTGGTGGACTTCAAGCGCAACAAGGATGGCATCGCCGCCAAGGTGGAGCGCATTGAATACGACCCGAACCGCACGGCCCACATCGCCCTGGTGTGCTACGCCGACGGCGAGCGCCGCTACATCATCGCTCCCCGTGGTCTGGAAGTCGGCAGCACGCTGATGTCCGGCTCCGAGGCGCCGATCCGCGCTGGCAACACGCTGCCGATTCGCAACATCCCGGTGGGCTCGACCATCCACTGCATCGAGATCAAGCCCGGTGCAGGTGCCCAGATCGCGCGCTCCGCAGGGGCTTCGGCCACGCTGCTGGCACGCGAGAGCATGTACGCCCAGGTGCGCATGCGCTCGGGTGAAGTGCGCCGCATCCACATCGAATGCCGCGCCACGATCGGCGAGGTGGCCAACGAAGAACACAGCCTGCGCCAGCTTGGCAAGGCCGGTGTGAAGCGCTGGATGGGTATCCGTCCGACGGTGCGTGGCGTGGCCATGAACCCGGTGGACCACCCGCACGGCGGCGGCGAAGGCCGCACCGGCGAAGGCCGCCATGCAGTCGACCCATGGGGCAACCTGACCAAGGGTTATCGCACCCGCAACAACAAGCGCACGCAGAACATGATTGTTTCGCGTCGCAAGAAATAA
PROTEIN sequence
Length: 275
MAVIKMKPTSPGQRAVVKVTRDHLHKGDGYAPLLEPQFQKAGRNNNGHITTRHKGGGHKHHYRVVDFKRNKDGIAAKVERIEYDPNRTAHIALVCYADGERRYIIAPRGLEVGSTLMSGSEAPIRAGNTLPIRNIPVGSTIHCIEIKPGAGAQIARSAGASATLLARESMYAQVRMRSGEVRRIHIECRATIGEVANEEHSLRQLGKAGVKRWMGIRPTVRGVAMNPVDHPHGGGEGRTGEGRHAVDPWGNLTKGYRTRNNKRTQNMIVSRRKK*