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scnpilot_p_inoc_scaffold_6458_7

Organism: SCNpilot_P_inoc_Acidovorax_68_4_fragment

partial RP 24 / 55 BSCG 24 / 51 MC: 1 ASCG 5 / 38
Location: comp(6647..7534)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 93.2
  • Coverage: 295.0
  • Bit_score: 562
  • Evalue 4.50e-157
Putative glycine cleavage system transcriptional activator (Gcv operon activator)(gcvA) id=12551318 bin=BDI species=Variovorax paradoxus genus=Variovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 92.9
  • Coverage: 295.0
  • Bit_score: 561
  • Evalue 5.50e-157
  • rbh
putative transcription regulator transcription regulator protein similarity KEGG
DB: KEGG
  • Identity: 62.0
  • Coverage: 295.0
  • Bit_score: 366
  • Evalue 9.60e-99

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Taxonomy

RLO_Burkholderiales_65_40 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 888
ATGCGCAAGGACATCCCCAGCCTCGGGGTACTGCAGGCCTTCGAGGCATCGGCGCGGCTGCAGAGCTTTTCGCGTGCGGCCGAGGAGCTGGCGCTCACCCCCAGCGCGGTGAGCCGCCATGTGGCGGCGCTCGAAGCGCGCCTGGGCGTGACGCTGTTCCTGCGCACGCGCCGCCGCCTGCTGCTGACCGACACCGGCCGCAGCTACGCCGCGCGCATCCGCCTGCACCTGGAGCAGATCGAGCGCGACACGCAGGAAATCCGCGTCGGCCGCGAAGAAGGCTATGTGCTGCACCTGGCGGTGGTGTCCACCTTCTGTACGCAGTGGCTCATTCCGCGCCTGCCGCAGTTTGCGGCGCAGCACCCGCGCATCACGCTCAACCTGTCGGTGCGCTCCGAGGCCTTTGCGTTTGACGAAAGCGGCTTCGACGCCGCCATCTACTACGGCGACCGGCTCTGGCCCGATACCCAGGGCTGCATGGTGGTGCCCGAAGGCCCCTGCGTGCCCGTGTGCAGCCCGCAGTACGCCGCCGCCCACGCGCTGCACGACGAGGCCGCCTGGCTGCACTGCCCGCACCTCACGCTGGCATCGCGCGCCAACGCCTGGCGCGACTGGTACGCCGCACGTGGCTGGCACTACACGCTGCACGCTTCGCGCGGGCCGCGCCACGAGGTGTTCTCCATGGTCATGGCAGCGGCAGCCGCCGGTTTGGGCGTGGGCCTGGTGCCGCGGCTGCTGGCGCAGGAGGCGCTGGAAGCCGGGCGGCTGGTGCAGGCGCACCCACAGGAACTGCCCGGCACGCAGGGCTACTGGTTCGTGCAGCCGCAGCACCGTCCGGGCTCGGACGCCCTGCAGGTGCTGCGCGACTGGCTGGCGACGCAGGCCTGA
PROTEIN sequence
Length: 296
MRKDIPSLGVLQAFEASARLQSFSRAAEELALTPSAVSRHVAALEARLGVTLFLRTRRRLLLTDTGRSYAARIRLHLEQIERDTQEIRVGREEGYVLHLAVVSTFCTQWLIPRLPQFAAQHPRITLNLSVRSEAFAFDESGFDAAIYYGDRLWPDTQGCMVVPEGPCVPVCSPQYAAAHALHDEAAWLHCPHLTLASRANAWRDWYAARGWHYTLHASRGPRHEVFSMVMAAAAAGLGVGLVPRLLAQEALEAGRLVQAHPQELPGTQGYWFVQPQHRPGSDALQVLRDWLATQA*