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scnpilot_p_inoc_scaffold_10160_2

Organism: SCNpilot_P_inoc_Acidovorax_68_4_fragment

partial RP 24 / 55 BSCG 24 / 51 MC: 1 ASCG 5 / 38
Location: comp(547..1617)

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Variovorax paradoxus RepID=UPI00037B85FA similarity UNIREF
DB: UNIREF100
  • Identity: 65.5
  • Coverage: 357.0
  • Bit_score: 443
  • Evalue 2.60e-121
  • rbh
membrane protein similarity KEGG
DB: KEGG
  • Identity: 73.4
  • Coverage: 282.0
  • Bit_score: 419
  • Evalue 8.80e-115
Candidate membrane protein {ECO:0000313|EMBL:AEG92770.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataou similarity UNIPROT
DB: UniProtKB
  • Identity: 73.4
  • Coverage: 282.0
  • Bit_score: 419
  • Evalue 4.40e-114

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Taxonomy

Ramlibacter tataouinensis → Ramlibacter → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1071
ATGCGCCCGGCCCACCTGTTCGAACTCTGCAAACGCGCCGTCAACGGCTGGATCGACGACTTTGCGCCGAGCATGGGCGCGGCCATTTCCTACTACACGGTGTTTTCGATCGCGCCGCTGCTGGTCATCGTCATTGCCGTGGCCGGGGCCCTCTTCGGGCGCGACGCGGTGCAGGGGCAGCTCGTCGGCCAGCTGCAGGGGCTCATCGGCCGCGAGGGCGCGGTGGTGGTGCAAGGCATCATCGAGAGCGCCAGCGCGCCGGAGCGGGGCCTGGTGGCTGGCGGCATCTGTGGGGTGGTGCTTCTGGTGGGCGCCACCACGGTGTTCGCCGAACTGCAAAGCGCGCTGGACCGCCTCTGGCACGTACCGGAAAAGCGCAAGCCCAGCGGCGTCTGGGCCATCCTGCGCGCGCGCGTGCTGTCCTTCGGGCTGATCCTCGGGCTGGCCTTCCTGCTCATGGTCTCGCTGGTGCTGAGCGCTGCCATTGCGGCGTTCGGTGGCTGGGCGGGCGCGCTGATGCCGGGCTGGGAGCTGCTGCTCCAGGGGGTCAACATGCTGGTCACCATGGCCATCACGGCGCTGCTGTTCGCCATGATCTTCAAGTTCATGCCCTCGGTGCCCATCGCCTGGCGCGACGTGTGGGTGGGCGGCGCGGTAACGGCCGTGCTGCTCGAAGCCGGCAAGTTCCTCATTGGCCTGTACCTGGGCAAGAGCGGCGTGGGCGAATCCTTCCAGGCCGCCGGCTCGCTGGTGGTGCTGCTCGCCTGGGTGTACTACGCCGCGCAGATCTTCCTGCTCGGCGCCGAGTTCACCAAGGTGTACTCCGACGACCGGGGCGGGCACGCCGGCCAGTGCGCGGTGCAGGCCACGCGCGTCAGCGCCGAGGTGGCGGCGCAGGGCACGGACGTCCTTGGGTCCCCCGCGGCGCCGCCCGCGCCGCCCGCCCGGCCCGCGCCCGAACCCGCGGTGGGCGTGGTGGTCGGCCTGATTGCCGGGGCGCTCCTGCGCCAGGTGCTGGGGCGCCGCTGGCGCGGCTGGCGAGCACGCCGGGCTTCACGCTCAAAATCCTAG
PROTEIN sequence
Length: 357
MRPAHLFELCKRAVNGWIDDFAPSMGAAISYYTVFSIAPLLVIVIAVAGALFGRDAVQGQLVGQLQGLIGREGAVVVQGIIESASAPERGLVAGGICGVVLLVGATTVFAELQSALDRLWHVPEKRKPSGVWAILRARVLSFGLILGLAFLLMVSLVLSAAIAAFGGWAGALMPGWELLLQGVNMLVTMAITALLFAMIFKFMPSVPIAWRDVWVGGAVTAVLLEAGKFLIGLYLGKSGVGESFQAAGSLVVLLAWVYYAAQIFLLGAEFTKVYSDDRGGHAGQCAVQATRVSAEVAAQGTDVLGSPAAPPAPPARPAPEPAVGVVVGLIAGALLRQVLGRRWRGWRARRASRSKS*