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scnpilot_p_inoc_scaffold_94

Search features with annotation key words

Displaying items 241-270 of 313 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_94_241
Bordetella parapertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(247538..248524)
DNA (987bp) protein (329aa)
Uncharacterized protein n=32 Tax=Bordetella RepID=F4LA51_BORPC rbh
tctC; Tripartite tricarboxylate transporter family receptor
Putative exported protein {ECO:0000313|EMBL:CCJ49874.1}; TaxID=1208660 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella parapert
scnpilot_p_inoc_scaffold_94_242
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

248641..249603
DNA (963bp) protein (321aa)
Probable LysR-family transcriptional regulator n=1 Tax=Bordetella bronchiseptica 1289 RepID=K4U0X9_BORBO
LysR family transcriptional regulator
Probable LysR-family transcriptional regulator {ECO:0000313|EMBL:CCN23209.1}; TaxID=1208657 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source
scnpilot_p_inoc_scaffold_94_243
Alcaligenes faecalis, Alcaligenes, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(249646..250986)
DNA (1341bp) protein (447aa)
HipA domain-containing protein n=1 Tax=Thauera phenylacetica B4P RepID=N6ZZP9_9RHOO rbh
Toxin HipA {ECO:0000313|EMBL:KGP02155.1}; TaxID=511 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Alcaligenes.;" source="Alcaligenes faecalis.;"
HipA N-terminal domain protein
scnpilot_p_inoc_scaffold_94_244
Thauera phenylacetica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(250989..251195)
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Thauera phenylacetica B4P RepID=N6Z182_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:ENO97620.1}; TaxID=1234382 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera phenylacetica B4P.
hypothetical protein
scnpilot_p_inoc_scaffold_94_245
Burkholderia pyrrocinia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(251472..252479)
DNA (1008bp) protein (336aa)
4-hydroxy-2-oxovalerate aldolase {ECO:0000256|HAMAP-Rule:MF_01656, ECO:0000256|SAAS:SAAS00035546}; Short=HOA {ECO:0000256|HAMAP-Rule:MF_01656};; EC=4.1.3.39 {ECO:0000256|HAMAP-Rule:MF_01656, ECO:00002
4-hyroxy-2-oxovalerate aldolase n=1 Tax=Pusillimonas noertemannii RepID=UPI0002E9C40F rbh
4-hydroxy-2-ketovalerate aldolase
scnpilot_p_inoc_scaffold_94_246
Burkholderia pyrrocinia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(252490..253440)
DNA (951bp) protein (317aa)
Acetaldehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01657, ECO:0000256|SAAS:SAAS00042164}; EC=1.2.1.10 {ECO:0000256|HAMAP-Rule:MF_01657, ECO:0000256|SAAS:SAAS00042125};; Acetaldehyde dehydrogenase [
acetaldehyde dehydrogenase n=1 Tax=Burkholderia sp. WSM4176 RepID=UPI00037646FB rbh
acetaldehyde dehydrogenase
scnpilot_p_inoc_scaffold_94_247
Acinetobacter nectaris, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

253662..254879
DNA (1218bp) protein (406aa)
hypothetical protein n=1 Tax=Spongiibacter tropicus RepID=UPI0003B308CA
Uncharacterized protein {ECO:0000313|EMBL:ESK37708.1}; TaxID=1392540 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter nect
diguanylate cyclase
scnpilot_p_inoc_scaffold_94_248
Pseudogulbenkiania ferrooxidans, Pseudogulbenkiania, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

254876..255361
DNA (486bp) protein (162aa)
AsnC family transcriptional regulator n=1 Tax=Pseudogulbenkiania ferrooxidans EGD-HP2 RepID=U1A238_9NEIS
AsnC family transcriptional regulator {ECO:0000313|EMBL:ERE16221.1}; TaxID=1388764 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Pseudogulbenkiania.;" source
AsnC family transcriptional regulator
scnpilot_p_inoc_scaffold_94_249
Bordetella parapertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(255371..256039)
DNA (669bp) protein (223aa)
Putative membrane protein n=1 Tax=Bordetella bronchiseptica (strain ATCC BAA-588 / NCTC 13252 / RB50) RepID=Q7WE02_BORBR
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:CCJ51715.1}; TaxID=1208660 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella parapert
scnpilot_p_inoc_scaffold_94_250
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(256101..257825)
DNA (1725bp) protein (575aa)
Candidate histidine kinase, classic n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y5A7_RAMTT rbh
Putative Candidate histidine kinase, classic {ECO:0000313|EMBL:CDI02993.1}; TaxID=1400863 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter.;" source
histidine kinase
scnpilot_p_inoc_scaffold_94_251
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

257972..258193
DNA (222bp) protein (74aa)
Uncharacterized protein {ECO:0000313|EMBL:CDI02994.1}; TaxID=1400863 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter.;" source="Candidatus Competib
scnpilot_p_inoc_scaffold_94_252
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

258196..258900
DNA (705bp) protein (235aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00037DD4BF
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:CDI02995.1}; TaxID=1400863 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter.;
two component transcriptional regulator, LuxR family
scnpilot_p_inoc_scaffold_94_253
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

259040..259543
DNA (504bp) protein (168aa)
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
scnpilot_p_inoc_scaffold_94_254
Pseudomonas psychrotolerans, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(259583..260488)
DNA (906bp) protein (302aa)
hypothetical protein n=1 Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=UPI0003805EC7 rbh
GntR family transcriptional regulator {ECO:0000313|EMBL:EHK69017.1}; TaxID=1112217 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pse
putative transcriptional regulator, GntR family
scnpilot_p_inoc_scaffold_94_255
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

260658..261623
DNA (966bp) protein (322aa)
hypothetical protein n=1 Tax=Pseudomonas putida RepID=UPI00031B3868
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGW90440.1}; TaxID=1366050 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii
scnpilot_p_inoc_scaffold_94_256
Streptomyces viridochromogenes, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

261636..263006
DNA (1371bp) protein (457aa)
Putative NADP+ dependent succinate-semialdehyde dehydrogenase n=1 Tax=Streptomyces viridochromogenes Tue57 RepID=L8P4P6_STRVR
Putative NADP+ dependent succinate-semialdehyde dehydrogenase {ECO:0000313|EMBL:ELS51134.1}; TaxID=1160705 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" sourc
aldehyde dehydrogenase
scnpilot_p_inoc_scaffold_94_257
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

263027..263440
DNA (414bp) protein (138aa)
hypothetical protein n=1 Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=UPI00036D91C1
Uncharacterized protein {ECO:0000313|EMBL:CDX35637.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium pluri
cupin 2 domain-containing protein
scnpilot_p_inoc_scaffold_94_258
Pseudomonas sp. 10-1B, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

263466..264527
DNA (1062bp) protein (354aa)
leuB2; 3-isopropylmalate dehydrogenase (EC:1.1.1.85)
hypothetical protein n=1 Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=UPI00037138C0 rbh
3-isopropylmalate dehydrogenase {ECO:0000313|EMBL:KIY41254.1}; TaxID=1546029 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomon
scnpilot_p_inoc_scaffold_94_259
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

264592..265560
DNA (969bp) protein (323aa)
ABC transporter substrate-binding protein n=1 Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=UPI00037F1F63 rbh
extra-cytoplasmic solute receptor family protein 40
Extra-cytoplasmic solute receptor family protein 40 {ECO:0000313|EMBL:ADP15522.1}; TaxID=762376 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;"
scnpilot_p_inoc_scaffold_94_260
BJP_IG2103_Dechloromonas_60_92, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

265663..266049
DNA (387bp) protein (129aa)
Putative uncharacterized protein n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KQE2_9BURK
hypothetical protein
Tax=BJP_IG2103_Dechloromonas_60_92
scnpilot_p_inoc_scaffold_94_261
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

266057..266560
DNA (504bp) protein (168aa)
Sigma-70 region 2:Sigma-70 region 4 n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47IQ3_DECAR
sigma-70 region 2:sigma-70 region 4
Sigma-70 region 2:sigma-70 region 4 {ECO:0000313|EMBL:BAO30457.1}; TaxID=1223802 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea.;" source="Sulfurita
scnpilot_p_inoc_scaffold_94_262
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

266565..267356
DNA (792bp) protein (264aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI0003770D3D rbh
Membrane protein {ECO:0000313|EMBL:GAO37064.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
PrtR transmembrane transcriptional regulator (anti-sigma factor)
scnpilot_p_inoc_scaffold_94_263
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

267475..268467
DNA (993bp) protein (331aa)
hypothetical protein n=1 Tax=Curvibacter lanceolatus RepID=UPI000378A603
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:GAD20489.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.
scnpilot_p_inoc_scaffold_94_264
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

268469..270037
DNA (1569bp) protein (523aa)
sulfatase family protein 7 (EC:3.1.6.-)
Sulfatase family protein 7 {ECO:0000313|EMBL:ADP17052.1}; EC=3.1.6.- {ECO:0000313|EMBL:ADP17052.1};; TaxID=762376 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae
Sulfatase family protein 7 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HNL3_ACHXA
scnpilot_p_inoc_scaffold_94_265
Bordetella sp. 8-296-03, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

270048..270815
DNA (768bp) protein (256aa)
Transcriptional regulator, GntR family n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WLF1_VEREI rbh
FCD domain protein {ECO:0000313|EMBL:KCB38065.1}; TaxID=1331258 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella hinzii 8-296-03
GntR domain-containing protein
scnpilot_p_inoc_scaffold_94_266
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

270812..271732
DNA (921bp) protein (307aa)
gluconolactonase (EC:3.1.1.17) rbh
gluconolactonase n=1 Tax=Variovorax paradoxus RepID=UPI000362F42B rbh
Gluconolactonase {ECO:0000313|EMBL:EJL71905.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
scnpilot_p_inoc_scaffold_94_267
Verminephrobacter eiseniae, Verminephrobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

271742..272668
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WLE9_VEREI rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM58456.1}; TaxID=391735 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Verminephrobacter.;" source="Verminephrobact
scnpilot_p_inoc_scaffold_94_268
Achromobacter insuavis, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

272701..273729
DNA (1029bp) protein (343aa)
4-hydroxythreonine-4-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154}; EC=1.1.1.262 {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154};; 4-(phosph
4-hydroxythreonine-4-phosphate dehydrogenase n=1 Tax=Achromobacter xylosoxidans AXX-A RepID=F7SUY1_ALCXX rbh
4-hydroxythreonine-4-phosphate dehydrogenase
scnpilot_p_inoc_scaffold_94_269
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

273749..274921
DNA (1173bp) protein (391aa)
Mandelate racemase/muconate lactonizing enzyme n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q129P1_POLSJ rbh
mandelate racemase/muconate lactonizing protein
Mandelate racemase/muconate lactonizing enzyme {ECO:0000313|EMBL:ABE44751.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source
scnpilot_p_inoc_scaffold_94_270
Halomonas anticariensis, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

274927..275916
DNA (990bp) protein (330aa)
GguC protein n=1 Tax=Halomonas lutea RepID=UPI00036C7F88 rbh
GguC protein {ECO:0000313|EMBL:EPC02756.1}; TaxID=1121939 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas anticariensis FP35 =
hypothetical protein
Displaying items 241-270 of 313 in total

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