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scnpilot_p_inoc_scaffold_128

Search features with annotation key words

Displaying items 121-150 of 255 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_128_121
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

119834..122650
DNA (2817bp) protein (939aa)
Isoleucine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_02002}; EC=6.1.1.5 {ECO:0000255|HAMAP-Rule:MF_02002};; Isoleucyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_02002}; Short=IleRS {ECO:0000255|HAMAP-Ru
ileS; isoleucyl-tRNA synthetase (EC:6.1.1.5) rbh
Isoleucine--tRNA ligase n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=SYI_BORPD rbh
scnpilot_p_inoc_scaffold_128_122
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

122650..123144
DNA (495bp) protein (165aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594};; Prolipoprotein signal pep
lspA; lipoprotein signal peptidase (EC:3.4.23.36)
Lipoprotein signal peptidase n=1 Tax=Bordetella pertussis (strain ATCC 9797 / DSM 5571 / NCTC 10739 / 18323) RepID=J7RHZ4_BORP1
scnpilot_p_inoc_scaffold_128_123
Burkholderia sp. RPE67, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(123163..123474)
DNA (312bp) protein (104aa)
RelE/StbE family addiction module toxin n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AGU9_9PROT
putative membrane protein
Putative membrane protein {ECO:0000313|EMBL:BAO87985.1}; TaxID=758796 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp.
scnpilot_p_inoc_scaffold_128_124
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(123475..123726)
DNA (252bp) protein (84aa)
Prevent-host-death family protein n=1 Tax=mine drainage metagenome RepID=T1B9Z8_9ZZZZ
RelB/StbD replicon stabilization protein (antitoxin to RelE/StbE)
Cupriavidus basilensis strain 4G11 chromosome main, complete sequence {ECO:0000313|EMBL:AJG21443.1}; TaxID=68895 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiacea
scnpilot_p_inoc_scaffold_128_125
Bordetella hinzii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

123781..125094
DNA (1314bp) protein (438aa)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase {ECO:0000313|EMBL:KCB44616.1}; EC=4.1.1.36 {ECO:0000313|EMBL:KCB44616.1};; EC=6.3.2.5 {ECO:0000313|EMBL:KCB44616.1};; Tax
coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase (EC:4.1.1.36)
Bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase n=2 Tax=Bordetella holmesii RepID=M5NU21_9BORD rbh
scnpilot_p_inoc_scaffold_128_126
unknown

Not on your lists

125115..125672
DNA (558bp) protein (186aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_128_127
Burkholderia cenocepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

125669..126118
DNA (450bp) protein (150aa)
dut; deoxyuridine 5'-triphosphate nucleotidohydrolase (EC:3.6.1.23)
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000255|HAMAP-Rule:MF_00116}; Short=dUTPase {ECO:0000255|HAMAP-Rule:MF_00116};; EC=3.6.1.23 {ECO:0000255|HAMAP-Rule:MF_00116};; dUTP pyrophosphata
Deoxyuridine 5'-triphosphate nucleotidohydrolase n=3 Tax=Burkholderia cenocepacia RepID=DUT_BURCA
scnpilot_p_inoc_scaffold_128_128
Burkholderia caribensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

126129..126845
DNA (717bp) protein (239aa)
hypothetical protein n=1 Tax=Streptomyces canus RepID=UPI00037154B8
Uncharacterized protein {ECO:0000313|EMBL:ETY84095.1}; TaxID=1323664 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia cari
GntR family transcriptional regulator
scnpilot_p_inoc_scaffold_128_129
Burkholderia caribensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(126859..127605)
DNA (747bp) protein (249aa)
3-oxoacyl-[acyl-carrier protein] reductase {ECO:0000313|EMBL:ETY84108.1}; EC=1.1.1.100 {ECO:0000313|EMBL:ETY84108.1};; TaxID=1323664 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderia
Uncharacterized protein n=1 Tax=Rhizobium sp. CF080 RepID=J2JT91_9RHIZ
FabG
scnpilot_p_inoc_scaffold_128_130
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(127610..128584)
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MUX8_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK93018.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp.
hypothetical protein
scnpilot_p_inoc_scaffold_128_131
Burkholderia caribensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(128667..130088)
DNA (1422bp) protein (474aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CF080 RepID=J2QBD8_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ETY84111.1}; TaxID=1323664 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia cari
MmgE/PrpD family protein
scnpilot_p_inoc_scaffold_128_132
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(130123..130962)
DNA (840bp) protein (280aa)
5-carboxymethyl-2-hydroxymuconate delta-isomerase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I468_9BURK
5-carboxymethyl-2-hydroxymuconate delta-isomerase
5-carboxymethyl-2-hydroxymuconate delta-isomerase {ECO:0000313|EMBL:AFU45939.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" sour
scnpilot_p_inoc_scaffold_128_133
Burkholderia caribensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(130982..131464)
DNA (483bp) protein (161aa)
Putative aromatic-ring-hydroxylating dioxygenase, beta subunit n=1 Tax=Variovorax paradoxus B4 RepID=T1XAI9_VARPD
Small subunit naph/bph dioxygenase {ECO:0000313|EMBL:ETY84106.1}; TaxID=1323664 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkho
putative aromatic-ring-hydroxylating dioxygenase, beta subunit
scnpilot_p_inoc_scaffold_128_134
Burkholderia caribensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(131491..132798)
DNA (1308bp) protein (436aa)
Dioxygenase hydroxylase n=1 Tax=Alcanivorax pacificus W11-5 RepID=K2HM41_9GAMM
Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenase, large terminal subunit {ECO:0000313|EMBL:ETY84107.1}; TaxID=1323664 species="Bacteria; Proteobacteria; Betaproteobacteria; Burk
ring hydroxylating dioxygenase subunit alpha/Rieske (2Fe-2S) protein
scnpilot_p_inoc_scaffold_128_135
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

132930..133718
DNA (789bp) protein (263aa)
putative aldolase; K02510 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase [EC:4.1.2.-] Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase (EC:4.1.2.20)
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase n=1 Tax=Glaciibacter superstes RepID=UPI0003B5905B
scnpilot_p_inoc_scaffold_128_136
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

133828..134427
DNA (600bp) protein (200aa)
Uncharacterized protein n=2 Tax=Bordetella bronchiseptica RepID=K4QFC2_BORBO
hypothetical protein
PF09998 family protein {ECO:0000313|EMBL:KDD64013.1}; TaxID=1331242 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchisept
scnpilot_p_inoc_scaffold_128_137
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(134414..134635)
DNA (222bp) protein (74aa)
Biotin/lipoyl attachment domain-containing protein n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A2Y0_STAND
biotin/lipoyl attachment domain-containing protein
Biotin/lipoyl attachment domain-containing protein {ECO:0000313|EMBL:ADH87698.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" sourc
scnpilot_p_inoc_scaffold_128_138
Pandoraea sp. RB-44, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(134665..136038)
DNA (1374bp) protein (458aa)
Biotin carboxylase n=2 Tax=Pandoraea RepID=V5UET9_9BURK rbh
biotin carboxylase
Biotin carboxylase {ECO:0000313|EMBL:AHB75486.1}; TaxID=1380774 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. RB-44.;"
scnpilot_p_inoc_scaffold_128_139
Advenella kashmirensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(136051..137289)
DNA (1239bp) protein (413aa)
L-carnitine dehydratase/bile acid-inducible protein F n=1 Tax=Advenella kashmirensis W13003 RepID=V8QT76_9BURK rbh
L-carnitine dehydratase/bile acid-inducible protein F {ECO:0000313|EMBL:ETF03151.1}; TaxID=1424334 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Adv
hypothetical protein
scnpilot_p_inoc_scaffold_128_140
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(137286..138308)
DNA (1023bp) protein (341aa)
TctC n=1 Tax=Comamonas testosteroni S44 RepID=D8DA47_COMTE
TctC {ECO:0000313|EMBL:EFI59989.1}; TaxID=563045 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni S44.;"
TctC
scnpilot_p_inoc_scaffold_128_141
Advenella kashmirensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(138334..139104)
DNA (771bp) protein (257aa)
GntR family transcriptional regulator n=1 Tax=Advenella kashmirensis (strain DSM 17095 / LMG 22695 / WT001) RepID=I3UAA3_ADVKW
GntR family transcriptional regulator
GntR family transcriptional regulator {ECO:0000313|EMBL:AFK61941.1}; TaxID=1036672 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella kashmiren
scnpilot_p_inoc_scaffold_128_142
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(139101..140666)
DNA (1566bp) protein (522aa)
pccB; propionyl-CoA carboxylase beta subunit (EC:6.4.1.3) Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
pccB; propionyl-CoA carboxylase beta subunit (EC:6.4.1.3)
Propionyl-CoA carboxylase beta subunit n=1 Tax=Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) RepID=F8GYI4_CUPNN rbh
scnpilot_p_inoc_scaffold_128_143
Thiorhodovibrio sp. 970, Thiorhodovibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

140968..141246
DNA (279bp) protein (93aa)
Phage-related protein n=1 Tax=Thiorhodovibrio sp. 970 RepID=H8Z702_9GAMM
Phage-related protein {ECO:0000313|EMBL:EIC19787.1}; TaxID=631362 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodovibrio.;" source="Thiorhodovibrio sp. 97
hypothetical protein
scnpilot_p_inoc_scaffold_128_144
Thiorhodospira sibirica, Thiorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

141243..141536
DNA (294bp) protein (98aa)
Transcriptional regulator, XRE family n=1 Tax=Thiorhodospira sibirica ATCC 700588 RepID=G4E7G0_9GAMM
Transcriptional regulator, XRE family {ECO:0000313|EMBL:EGZ43989.1}; TaxID=765914 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thiorhodospira.;" source
transcriptional regulator, XRE family
scnpilot_p_inoc_scaffold_128_145
Cupriavidus necator, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(141583..142752)
DNA (1170bp) protein (390aa)
ABC transport system permease protein HAAT family n=1 Tax=Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) RepID=G0EV26_CUPNN rbh
HAAT family ABC transporter permease
ABC transport system permease protein HAAT family {ECO:0000313|EMBL:AEI78266.1}; TaxID=1042878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;"
scnpilot_p_inoc_scaffold_128_146
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(142859..144079)
DNA (1221bp) protein (407aa)
Heavy metal efflux outer membrane protein, CzcC n=1 Tax=Comamonas testosteroni S44 RepID=D8D5J5_COMTE rbh
transporter
Heavy metal efflux outer membrane protein, CzcC {ECO:0000313|EMBL:EFI61826.1}; TaxID=563045 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source=
scnpilot_p_inoc_scaffold_128_147
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(144072..147191)
DNA (3120bp) protein (1040aa)
Heavy metal efflux pump, CzcA family n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BPA1_DELAS rbh
Heavy metal efflux pump, CzcA family {ECO:0000313|EMBL:ABX32665.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acid
CzcA family heavy metal efflux protein
scnpilot_p_inoc_scaffold_128_148
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(147201..148313)
DNA (1113bp) protein (371aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BPA2_DELAS rbh
RND family efflux transporter MFP subunit
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ABX32666.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delft
scnpilot_p_inoc_scaffold_128_149
Ralstonia sp. PBA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(148436..149860)
DNA (1425bp) protein (475aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=795666 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; R
Two-component sensor histidine kinase n=1 Tax=Ralstonia sp. PBA RepID=I9BRW7_9RALS rbh
ragB; two-component sensor histidine kinase rbh
scnpilot_p_inoc_scaffold_128_150
Ralstonia sp. PBA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(149857..150540)
DNA (684bp) protein (228aa)
Two component transcriptional regulator n=1 Tax=Ralstonia sp. PBA RepID=I9W248_9RALS
Two component transcriptional regulator {ECO:0000313|EMBL:EIZ02497.1}; TaxID=795666 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralst
two-component transcriptional regulator
Displaying items 121-150 of 255 in total

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