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scnpilot_p_inoc_scaffold_455

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Displaying items 91-120 of 125 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_455_91
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(97931..98671)
DNA (741bp) protein (247aa)
Extracellular solute-binding protein family 3 n=1 Tax=beta proteobacterium CB RepID=M1SUM1_9PROT rbh
Amino acid-binding protein {ECO:0000313|EMBL:KJS08711.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
Extracellular solute-binding protein family 3
scnpilot_p_inoc_scaffold_455_92
Cupriavidus metallidurans, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(98815..100137)
DNA (1323bp) protein (441aa)
Uncharacterized protein n=2 Tax=Cupriavidus RepID=Q1LC93_RALME rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABF12233.1}; TaxID=266264 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Ralstonia metallidu
scnpilot_p_inoc_scaffold_455_93
Cupriavidus metallidurans, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(100162..102213)
DNA (2052bp) protein (684aa)
hypothetical protein n=1 Tax=Chitiniphilus shinanonensis RepID=UPI00037D47C2 rbh
TonB-dependent outer-membrane transporter rbh
TonB-dependent outer-membrane transporter {ECO:0000313|EMBL:ABF12232.1}; TaxID=266264 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="R
scnpilot_p_inoc_scaffold_455_94
Achromobacter arsenitoxydans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(102390..103358)
DNA (969bp) protein (323aa)
hypothetical protein n=1 Tax=Cupriavidus sp. BIS7 RepID=UPI00036203E7 rbh
Uncharacterized protein {ECO:0000313|EMBL:EHK65934.1}; TaxID=477184 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter arsen
hypothetical protein
scnpilot_p_inoc_scaffold_455_95
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(103403..104035)
DNA (633bp) protein (211aa)
Dimethylmenaquinone methyltransferase n=1 Tax=Achromobacter arsenitoxydans SY8 RepID=H0F719_9BURK
Diguanylate cyclase {ECO:0000313|EMBL:KGY25422.1}; TaxID=85698 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Alcaligenes xylosoxydans
dimethylmenaquinone methyltransferase
scnpilot_p_inoc_scaffold_455_96
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

104165..104875
DNA (711bp) protein (237aa)
Putative transcriptional regulator n=1 Tax=Bordetella bronchiseptica (strain ATCC BAA-588 / NCTC 13252 / RB50) RepID=Q7WMY2_BORBR
IclR family transcriptional regulator {ECO:0000313|EMBL:KGY28803.1}; TaxID=85698 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Alcali
transcriptional regulator
scnpilot_p_inoc_scaffold_455_97
Achromobacter arsenitoxydans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

104872..105945
DNA (1074bp) protein (358aa)
LysR family transcriptional regulator n=1 Tax=Achromobacter arsenitoxydans SY8 RepID=H0F427_9BURK
LysR family transcriptional regulator {ECO:0000313|EMBL:EHK66922.1}; TaxID=477184 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achro
LysR family transcriptional regulator
scnpilot_p_inoc_scaffold_455_98
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(105884..106795)
DNA (912bp) protein (304aa)
Fumarylacetoacetate (FAA) hydrolase family protein 10 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HHE1_ACHXA rbh
fumarylacetoacetate hydrolase
Fumarylacetoacetate (FAA) hydrolase family protein 10 {ECO:0000313|EMBL:ADP19091.1}; TaxID=762376 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.
scnpilot_p_inoc_scaffold_455_99
Cupriavidus sp. SK-4, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(106824..107786)
DNA (963bp) protein (321aa)
Extra-cytoplasmic solute receptor family protein 158 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HHE0_ACHXA rbh
ABC transporter substrate-binding protein {ECO:0000313|EMBL:EYS84950.1}; TaxID=574750 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="C
extra-cytoplasmic solute receptor family protein 158
scnpilot_p_inoc_scaffold_455_100
Alcaligenes faecalis, Alcaligenes, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(107819..108172)
DNA (354bp) protein (118aa)
Endoribonuclease L-PSP n=4 Tax=Burkholderia cenocepacia RepID=A0KDV8_BURCH
Uncharacterized protein {ECO:0000313|EMBL:KGP01309.1}; TaxID=511 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Alcaligenes.;" source="Alcaligenes faecalis.;"
endoribonuclease L-PSP
scnpilot_p_inoc_scaffold_455_101
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(108277..109185)
DNA (909bp) protein (303aa)
LysR family regulatory protein n=1 Tax=Bordetella bronchiseptica 253 RepID=K4QIN8_BORBO rbh
LysR family regulatory protein
LysR substrate-binding domain protein {ECO:0000313|EMBL:KCV63577.1}; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordete
scnpilot_p_inoc_scaffold_455_102
Achromobacter insuavis, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(109211..109984)
DNA (774bp) protein (258aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Achromobacter xylosoxidans AXX-A RepID=F7T645_ALCXX rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EGP44252.1}; TaxID=1003200 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Ac
short-chain dehydrogenase
scnpilot_p_inoc_scaffold_455_103
Legionella fallonii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(110104..110706)
DNA (603bp) protein (201aa)
Putative uncharacterized protein n=1 Tax=Legionella drancourtii LLAP12 RepID=G9ELA1_9GAMM
putative phosphoglycerate mutase
Putative phosphoglycerate mutase {ECO:0000313|EMBL:CEG56048.1}; TaxID=1212491 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella fa
scnpilot_p_inoc_scaffold_455_104
Bordetella pertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(110713..112167)
DNA (1455bp) protein (485aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000255|HAMAP-Rule:MF_00121}; Short=Asp/Glu-ADT subunit B {ECO:0000255|HAMAP-Rule:MF_00121};; EC=6.3.5.- {ECO:0000255|HAMAP-Rule:MF_0012
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=3 Tax=Bordetella bronchiseptica RepID=K0N3E6_BORBM rbh
gatB; glutamyl-tRNA(GLN) amidotransferase subunit B rbh
scnpilot_p_inoc_scaffold_455_105
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(112189..113718)
DNA (1530bp) protein (510aa)
gatA; glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase subunit A (EC:6.3.5.-)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000256|HAMAP-Rule:MF_00120}; Short=Glu-ADT subunit A {ECO:0000256|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000256|HAMAP-Rule:MF_00120};; TaxID=762376
glutamyl-tRNA amidotransferase subunit A n=1 Tax=Bordetella sp. FB-8 RepID=UPI0003642687 rbh
scnpilot_p_inoc_scaffold_455_106
Advenella kashmirensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(113723..114031)
DNA (309bp) protein (103aa)
gatC; asparaginyl/glutamyl-tRNA amidotransferase subunit C (EC:6.3.5.7)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000256|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000256|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_0012
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=1 Tax=Advenella kashmirensis (strain DSM 17095 / LMG 22695 / WT001) RepID=I3U9D9_ADVKW
scnpilot_p_inoc_scaffold_455_107
Bordetella avium, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

114245..115288
DNA (1044bp) protein (348aa)
Rod shape-determining protein MreB n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9I0I2_BORPD rbh
envB; rod shape-determining protein MreB
Rod shape-determining protein {ECO:0000313|EMBL:CAJ50786.1}; TaxID=360910 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella avium
scnpilot_p_inoc_scaffold_455_108
Bordetella pertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

115399..116331
DNA (933bp) protein (311aa)
Cell shape-determining protein MreC n=31 Tax=Bordetella RepID=F4LAG6_BORPC
mreC; rod shape-determining protein MreC
Cell shape-determining protein MreC {ECO:0000256|PIRNR:PIRNR038471}; Cell shape protein MreC {ECO:0000256|PIRNR:PIRNR038471}; TaxID=743278 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkho
scnpilot_p_inoc_scaffold_455_109
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

116432..116974
DNA (543bp) protein (181aa)
Rod shape-determining protein MreD n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HMV0_ACHXA
Rod shape-determining protein MreD {ECO:0000313|EMBL:KCV60513.1}; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella
mreD; rod shape-determining protein MreD
scnpilot_p_inoc_scaffold_455_110
Herbaspirillum sp. CF444, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

117051..118952
DNA (1902bp) protein (634aa)
mrdA; Peptidoglycan glycosyltransferase (penicillin-binding protein 2) (EC:2.4.1.129)
penicillin-binding protein 2 n=1 Tax=Herbaspirillum lusitanum RepID=UPI00035C14AE rbh
Penicillin-binding protein 2 {ECO:0000313|EMBL:EJL86420.1}; Flags: Precursor;; TaxID=1144319 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;"
scnpilot_p_inoc_scaffold_455_111
Bordetella hinzii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

118945..120111
DNA (1167bp) protein (389aa)
Rod shape-determining protein n=2 Tax=Bordetella holmesii RepID=M5NJR1_9BORD rbh
Rod shape-determining protein RodA {ECO:0000313|EMBL:KCB45776.1}; TaxID=1331257 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella
mrdB; rod shape-determining protein RodA
scnpilot_p_inoc_scaffold_455_112
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(120122..120451)
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9I597_BORPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAP41076.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (str
scnpilot_p_inoc_scaffold_455_113
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(120474..121421)
DNA (948bp) protein (316aa)
Putative secreted protein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9I592_BORPD rbh
bug18; hypothetical protein
Putative secreted protein {ECO:0000313|EMBL:CAP41074.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (s
scnpilot_p_inoc_scaffold_455_114
Achromobacter sp. RTa, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(121495..122373)
DNA (879bp) protein (293aa)
Putative Transcriptional regulator, IclR family n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9I589_BORPD rbh
IclR family transcriptional regulator {ECO:0000313|EMBL:KGD88064.1}; TaxID=1532557 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achr
IclR family transcriptional regulator
scnpilot_p_inoc_scaffold_455_115
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

122533..123333
DNA (801bp) protein (267aa)
Transcriptional regulator, IclR-family n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9I585_BORPD rbh
IclR family transcriptional regulator
Transcriptional regulator, IclR-family {ECO:0000313|EMBL:CAP41071.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordete
scnpilot_p_inoc_scaffold_455_116
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(123347..124150)
DNA (804bp) protein (268aa)
alpha-ketoglutarate-dependent taurine dioxygenase n=1 Tax=Henriciella marina RepID=UPI0003721203
Bradyrhizobium elkanii strain UASWS1015 Contig175, whole genome shotgun sequence {ECO:0000313|EMBL:KIU48975.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrh
putative dioxygenase
scnpilot_p_inoc_scaffold_455_117
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(124186..125220)
DNA (1035bp) protein (345aa)
NagM n=1 Tax=Ralstonia sp. U2 RepID=Q9Z3X3_9RALS
extra-cytoplasmic solute receptor Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
tripartite tricarboxylate transporter receptor family protein
scnpilot_p_inoc_scaffold_455_118
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(125258..126442)
DNA (1185bp) protein (395aa)
mandelate racemase/muconate lactonizing-like protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
Blr6118 protein id=3732187 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
mandelate racemase/muconate lactonizing-like protein
scnpilot_p_inoc_scaffold_455_119
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(126439..127395)
DNA (957bp) protein (319aa)
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8EMF1_METSB
D-isomer specific 2-hydroxyacid dehydrogenase Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
D-isomer specific 2-hydroxyacid dehydrogenase
scnpilot_p_inoc_scaffold_455_120
Photorhabdus luminescens, Photorhabdus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(127398..128402)
DNA (1005bp) protein (335aa)
Complete genome; segment 8/17 n=1 Tax=Photorhabdus luminescens subsp. laumondii (strain TT01) RepID=Q7N4X1_PHOLL
hypothetical protein
Complete genome; segment 8/17 {ECO:0000313|EMBL:CAE14486.1}; TaxID=243265 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Photorhabdus.;" source="Photorh
Displaying items 91-120 of 125 in total

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