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scnpilot_p_inoc_scaffold_102_27

Organism: SCNpilot_P_inoc_Burkholderiales_62_9

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: comp(23839..25212)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI0003781560 similarity UNIREF
DB: UNIREF100
  • Identity: 54.5
  • Coverage: 468.0
  • Bit_score: 467
  • Evalue 1.30e-128
outer membrane efflux protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 50.9
  • Coverage: 458.0
  • Bit_score: 435
  • Evalue 7.60e-119
outer membrane efflux protein similarity KEGG
DB: KEGG
  • Identity: 45.2
  • Coverage: 460.0
  • Bit_score: 383
  • Evalue 6.90e-104

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Taxonomy

RLO_Burkholderiales_61_40 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1374
GTGCGCGGGGCGCTGGCCTGGCTGGCCGTCGTCCTGCACACGGGCGCGGCGGCCCAGGTGCTGCCCGCCCTGAGCTTCCAGGCGGCGCAGCAGCAGGTGCTGACGCGGTCCGACAAGCTGGGCGCGGCGCGGGCAGCGGTCGAAAGCAAGGAACTCCAGTTGGAAGGCGTGCGCAACCTGGGCGGGCCTTCGCTCAGCGTGTCCGCGTCCCACCTCCGCTACGAGGCCAACGCCAATCTCAGCCTGTCGGGGCTGAACAACATCGGCATTCCGCTGCCCCTGCCTTCCAACGTGGAGCTGGAACGGCGCGGCTCCCTGACCAACAAATCCCTGATCGGCATCTGGCCGCTCTATCTGGGCGGGGCCACCGACGCGGCGCGCGGCCTGGTCCATGCCCAGGCCGACGAGGCGCGCGCGGACGCGACCCAGGCCGGCTACGAAGTGCAGACCACGCTGGCCAAGCGCTATTTCGCCGCGCAGCTCGCCGCCCGCGCCTGGGACCTGCGCCGCGAGGCCCTGCGCGCCATCGGCGAGCACGACCGCGCGGCCGAACGCATGATGGCCGAAGGCACGATTGCCCGCGTCGATCGATTGCGGGCTCGCGTTGCGCTGGAGGATGCGCGGCGCGAGGAGCGCAAGGCGCAGGACACGCTGGAACTGGCGCAGGTCGCGCTGGGCCGCACGCTGCGCATGGACGAGGCGGTGCGGCCTTCGACACCGCTGTTCATCCTGACCCAGGCGATCGAACCGCTGCCGTATTTCCTGGAAGCCGCGATGCACGGCCATCCCGCGCTGGGCAAGGTCGCGGCCAAGGAAGAACAGGCGCGCCAGCTGCATGCGGTGGAGACCGCCACGCGGCGCCCGCAGGTGTTCGCGTTCGGCGGGCACCAGATCCGCAGCGAGAACGGCAGCTGGCTGGTGGGCGTGGGCGTGCGCTGGACGCTGTGGGACTCGCTGGACCGGCCCTCGCTGGACGCCGCCAGCGACAAGACCATCCTGCAGGCCCAACTGACCGAGGCCCAGGCGCGGCAGGACATCAGCCTGCTGGTGGAAAGCAAGTGGCGCGCGGTGGACCAGGCGCGCCGCCAGTTCCTCGCGACCGCCGCCAGCGTGGAGCTGGCCGACGAGGTGGTGCGCCTGCGCACCAGTGGCCTGCGCGAAGGCGTCAGCACCGCCACCGACCTGATCGATGCCGAGACCAACCGCGCCAAGGTGCAGACCGAAAGGGCGCAGGCCGCCTACGACTACATCCAGTCCCTGGCCGAGCTGCTGGAGGCCAGCGGGCTGGGCGGCGAGCTGACGCGCTACATCGAACGGGCGGACGTGCGCCTGCCGCTGGCGGCCGTGGTCGCCGACCCCGCCCGCAGCCCCTGA
PROTEIN sequence
Length: 458
VRGALAWLAVVLHTGAAAQVLPALSFQAAQQQVLTRSDKLGAARAAVESKELQLEGVRNLGGPSLSVSASHLRYEANANLSLSGLNNIGIPLPLPSNVELERRGSLTNKSLIGIWPLYLGGATDAARGLVHAQADEARADATQAGYEVQTTLAKRYFAAQLAARAWDLRREALRAIGEHDRAAERMMAEGTIARVDRLRARVALEDARREERKAQDTLELAQVALGRTLRMDEAVRPSTPLFILTQAIEPLPYFLEAAMHGHPALGKVAAKEEQARQLHAVETATRRPQVFAFGGHQIRSENGSWLVGVGVRWTLWDSLDRPSLDAASDKTILQAQLTEAQARQDISLLVESKWRAVDQARRQFLATAASVELADEVVRLRTSGLREGVSTATDLIDAETNRAKVQTERAQAAYDYIQSLAELLEASGLGGELTRYIERADVRLPLAAVVADPARSP*