ggKbase home page

scnpilot_p_inoc_scaffold_102_34

Organism: SCNpilot_P_inoc_Burkholderiales_62_9

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: comp(31057..32304)

Top 3 Functional Annotations

Value Algorithm Source
glyA3; serine hydroxymethyltransferase (EC:2.1.2.1) similarity KEGG
DB: KEGG
  • Identity: 84.3
  • Coverage: 414.0
  • Bit_score: 716
  • Evalue 5.30e-204
  • rbh
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAM similarity UNIPROT
DB: UniProtKB
  • Identity: 84.3
  • Coverage: 414.0
  • Bit_score: 716
  • Evalue 2.60e-203
Serine hydroxymethyltransferase n=1 Tax=Pseudomonas pseudoalcaligenes CECT 5344 RepID=I7IYY0_PSEPS similarity UNIREF
DB: UNIREF100
  • Identity: 84.3
  • Coverage: 414.0
  • Bit_score: 716
  • Evalue 1.90e-203
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudomonas pseudoalcaligenes → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1248
ATGTTCGACCGCAACCGCACCATCGCCCAGGCCGATCCCGAACTCTGGTCCGCCATCGAGCTGGAAAACCAGCGGCAGGAACAGCACATCGAGCTGATCGCCTCGGAAAACTACGCCAGCCCCGCCGTCATGCAGGCCCAGGGCACGCAGCTCACCAACAAGTACGCCGAAGGCTATCCCGGCAAGCGCTATTACGGCGGCTGCGAATTCGTCGACATCGTCGAGCAGCTGGCCATCGACCGCGCCAAGCAGATCTTCGGTGCCGACGCCGTGAACGTGCAGCCCAATTCGGGTTCGCAGGCCAACCAGGGCGTGTACATGGCCGTGCTCAAGCCCGGCGACACCGTGCTGGGCATGAGCCTGGCCGAGGGTGGCCACCTGACGCACGGTTCGCCGGTCAACGCCTCGGGCAAGCTGTATAACTTCCTGTCCTATGGCCTGAACGCCCAGGAAGAAATCGATTACGACCAGGTCGCGCGCCTGGCCGCCGAGCACAAGCCCAAGCTGATCGTGGCCGGCGCCTCGGCCTATGCGCTGCGCATCGACTTCGCCCGTTTCGCCGAGATCGCCAAGGCCAACGGCGCGCTGTTCATGGTGGACATCGCCCACTACGCCGGCCTGGTCGCCGGCGGCGCCTATCCCAACCCGGTTCCGCACGCCGATTTCGTCACCTCGACCACGCACAAGTCGCTGCGCGGCCCGCGCGGCGGCCTGATCATGTGCAAGGCCGAGTTCGAGAAGGCCGTCAATTCCGCCATCTTCCCGGGCATCCAGGGTGGTCCGCTCGAGCACGTCATCGCCGCCAAGGCCGTGGCCTTCAAGGAAGCGCTGGATCCCTCGTTCAAGCAGTACGCCGCCCAGGTCGTGGCCAACGCCAAGGTGATGGCCGAGACGCTGGTCGAGCGCGGCCTGCGCATCGTGTCGGGACGCACCGAAAGCCACGTCATGCTGGTGGACCTGCGCGCCAAGGGCATCACGGGCAAGGACGCCGAGCTGGCGCTGGGCCAGGCCCACATCACGGTCAATAAGAACGCCATCCCGAACGATCCGGAGAAGCCCTTCGTGACCAGCGGCGTGCGTGTCGGCTCGCCGGCCATGACCACGCGCGGCTTCAAGGAAGACGAGACCCGCCTGACCGCCAACCTCATCGCCGACGTGCTGGACAACCCGCGCGACGAGGCCAACATCGCGGCCGTGCGTGAGCGCGTCAACGCCCTGACCGCGAAGTTCCCGGTCTACGGTGGATAG
PROTEIN sequence
Length: 416
MFDRNRTIAQADPELWSAIELENQRQEQHIELIASENYASPAVMQAQGTQLTNKYAEGYPGKRYYGGCEFVDIVEQLAIDRAKQIFGADAVNVQPNSGSQANQGVYMAVLKPGDTVLGMSLAEGGHLTHGSPVNASGKLYNFLSYGLNAQEEIDYDQVARLAAEHKPKLIVAGASAYALRIDFARFAEIAKANGALFMVDIAHYAGLVAGGAYPNPVPHADFVTSTTHKSLRGPRGGLIMCKAEFEKAVNSAIFPGIQGGPLEHVIAAKAVAFKEALDPSFKQYAAQVVANAKVMAETLVERGLRIVSGRTESHVMLVDLRAKGITGKDAELALGQAHITVNKNAIPNDPEKPFVTSGVRVGSPAMTTRGFKEDETRLTANLIADVLDNPRDEANIAAVRERVNALTAKFPVYGG*