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scnpilot_p_inoc_scaffold_102_108

Organism: SCNpilot_P_inoc_Burkholderiales_62_9

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: comp(117279..118715)

Top 3 Functional Annotations

Value Algorithm Source
Drug resistance transporter, EmrB/QacA subfamily n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V395_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 77.1
  • Coverage: 480.0
  • Bit_score: 701
  • Evalue 4.20e-199
  • rbh
EmrB/QacA subfamily drug resistance transporter similarity KEGG
DB: KEGG
  • Identity: 77.5
  • Coverage: 476.0
  • Bit_score: 701
  • Evalue 1.60e-199
Drug resistance transporter, EmrB/QacA subfamily {ECO:0000313|EMBL:ADU39234.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" sourc similarity UNIPROT
DB: UniProtKB
  • Identity: 77.5
  • Coverage: 476.0
  • Bit_score: 701
  • Evalue 7.80e-199

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1437
GTGAATGTCGACCTCGACCGCCGCAAACGCTGGCTGGCCTTGATGGTGCTGTGCCTGGGCGTGCTGATGATCGTGCTCGACACGACCATCGTGAACGTGGCGCTGCCCTCGATCCGCGACGACCTGAAATTCTCCGAGACCGCGCTGGTCTGGGTGGTCAACGCCTACATGCTGACCTTCGGCGGTTTCCTGCTGCTGGGCGGGCGGCTGGGCGATCTGTACGGACACCGGCGGCTGTTCGTCGCCGGCATCGCGTTGTTCACCGCGGCGTCGCTGGCCTGCGGGCTGGCCCAGTCCCAGGCCGTGCTGGTGGCGGCGCGCGCGGTGCAGGGCCTGGGCGGCGCGGTGGTCTCCGCGGTGTCGCTGTCTCTGATCATGATGCTGTTTCCGGAGCAGGAGGATCGCGCCAAGGCCATGGGCGTCTACGGCTTCGTGTGCGCGGGGGGCGGCAGCATAGGCGTGCTGCTGGGGGGCTTCCTGACCAGCGTGCTCAGCTGGCACTGGATCTTCCTGGTCAACCTGCCCATAGGCGCGGCCGTCTACGGCCTGTGCATGGCGCTGCTGCCGGCCAAGGGCGGGCAGCCGGGCGAGCGGCTGGACATGGCCGGCGCGGCGGCGATCACCGCCTCGCTGATGCTGGCCGTGTATGCCGTGGTCAACGGCAACGAGCGCGGCTGGATCTCGTTCCACACGCTGGGCTTGCTGGGTGCCGCCGCCGTGCTGCTGGCGGCCTTCCTGGCCATCGAGTCCCGCGTGCGCGCGCCGTTGATGCCCCTGGGGCTGTTCCGGCTGCGCAACGTTGCCACGGCCAACGCGGCCGGCGTGCTGTGGGCCGCCGCCATGTTCGCCGCCTTCTTCATTTCCGCGCTGTACCTGCAAGTGGTGCTGGGCTACAGCCCCATGCAGGTGGGGCTGGCCTTCCTGCCGGCCAACATCATCATGGCGGTATTCTCGCTCGGCCTGTCGGCGCGGCTGGTGATGCGCTTCGGCATCCGGCTGCCGCTGGCCTGTGGGCTGGCGGTGGCGTCGGTGGGGCTGGCGCTGTTCGCGCGGGCACCGATCCAGGGCAGCTTTCTGGTCGATGTACTGCCCGCCATGTCGCTGCTGGGCCTGGGCGCGGGCATCGCGTTCAACCCCATGCTGCTGGCAGCCATGAACGACGTGGATCCTCGCGATGCCGGCCTGGCCTCGGGCGTGGTGAATACCTCGTTCATGATGGGCGGCGCGCTGGGCCTGGCCGTGCTGGCCAGCCTGGCGGCGGCGCGGACGAGCTTCATGCTGGAGCGGGGCGCCGCCCAGGTTGCCGCGCTGAACGGCGGCTACCAACTGGCCTTCGCCCTGGGGGCGGCATGCGGCGCGGTGGCCGCGGTCCTGTGCGCGATGTTGCTGCGCTCGCCCGCGGCGGAGCGGGCGGCCGATTCGGCGCCGGCGGCGTAG
PROTEIN sequence
Length: 479
VNVDLDRRKRWLALMVLCLGVLMIVLDTTIVNVALPSIRDDLKFSETALVWVVNAYMLTFGGFLLLGGRLGDLYGHRRLFVAGIALFTAASLACGLAQSQAVLVAARAVQGLGGAVVSAVSLSLIMMLFPEQEDRAKAMGVYGFVCAGGGSIGVLLGGFLTSVLSWHWIFLVNLPIGAAVYGLCMALLPAKGGQPGERLDMAGAAAITASLMLAVYAVVNGNERGWISFHTLGLLGAAAVLLAAFLAIESRVRAPLMPLGLFRLRNVATANAAGVLWAAAMFAAFFISALYLQVVLGYSPMQVGLAFLPANIIMAVFSLGLSARLVMRFGIRLPLACGLAVASVGLALFARAPIQGSFLVDVLPAMSLLGLGAGIAFNPMLLAAMNDVDPRDAGLASGVVNTSFMMGGALGLAVLASLAAARTSFMLERGAAQVAALNGGYQLAFALGAACGAVAAVLCAMLLRSPAAERAADSAPAA*