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scnpilot_p_inoc_scaffold_94_98

Organism: SCNpilot_P_inoc_Burkholderiales_62_9

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: comp(103160..105109)

Top 3 Functional Annotations

Value Algorithm Source
Transporter, betaine/carnitine/choline family n=1 Tax=Achromobacter piechaudii ATCC 43553 RepID=D4X8U8_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 78.9
  • Coverage: 648.0
  • Bit_score: 1040
  • Evalue 0.0
  • rbh
Transporter, betaine/carnitine/choline family {ECO:0000313|EMBL:EFF76807.1}; TaxID=742159 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" sourc similarity UNIPROT
DB: UniProtKB
  • Identity: 78.9
  • Coverage: 648.0
  • Bit_score: 1040
  • Evalue 0.0
high-affinity choline transporter similarity KEGG
DB: KEGG
  • Identity: 77.3
  • Coverage: 648.0
  • Bit_score: 1030
  • Evalue 0.0

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Taxonomy

Achromobacter piechaudii → Achromobacter → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1950
ATGAAAACAACGATAGATCGCCCAGTGTTCTTCACCGCGGCCGCTTTCATCCTGGCGCTGGTCGCATGCGCGGTGGCCGTCCCGCGTGTCGTCGGAGACGTCTTCGACACGATCCAGGGGTGGATACTGACGAACGTCAGCTGGTTCTACATCCTGGCGGTGGCCATCATCCTGCTGTCGGTCGTGTTCATGGCGGTCAGCCGCTACGGCAGCATCAAGCTGGGGCCGGACCACAGCGAGCCCGACTACCGGAACTTCACCTGGTTCGCGATGCTGTTCTCGGCCGGCATGGGCATCGGGTTGATGTTCTTCGGCGTGGCCGAACCCATCATGCACCTGGTCTCGCCGCCCGTGGGCGAGGCAGGCACCGTGGCCGCGGCCCGCGAAGCCATGAGGATCACCTTCTTCCACTGGGGCCTGCACGCCTGGTCCCTCTACGCGATCGTGGCGCTGGTCCTGGCCTATTTCAGTTATCGCCACAATCTGCCGCTGACGTTGCGGTCCGCGCTGTATCCCTTCATCGGCGACCGCATCCACGGCCCCATCGGCAACGCCGTGGACATCTTCGCGATCATCAGCACCGTGTTCGGCGTCGCGACGTCGCTGGGGCTGGGCGTGGCGCAGATCAACAGCGGCCTGCACCACTTGTTCGGGACGCCCGTCGGCACGACCACCCAGATCATCCTGATCGCCATCGCCTGCGGCCTGGCGACGCTGTCGGTGGCGAGCGGGCTGGACCGCGGCATACGCATCCTGTCCGAAGCCAACCTGTACCTGGCGGTGATCCTGCTGGTGTTCGTGCTGGCCGTCGGGCCGACCATCTTCCTTTTGCAGAGCTTCCTGCAGAACATCGGCGCTTACCTGTCCGACATCGTCGCCAAGACCTTCAATCTCTATGCCTACCAGCCCACGGACTGGATAGGCGGCTGGACGCTGTTCTACTGGGGCTGGTGGATCGCCTGGTCGCCGTTCGTGGGGCTGTTCATCGCCCGCATCTCGCGCGGCAGGACGATACGCGAGTTCGTGCTGGGCGTGCTGCTGGTGCCCACGGGCTTCACCTTCCTGTGGATGACGGTGTTCGGCGGCTCGGCCATTCATCTGGTGTTGTTCGAGCACCTGGACAGCCTGGCCGACACGGTCAAGGCGGACAGTTCGCTGGCGCTGTTCGCCTTCCTCGAGCACTACCCTTGGGGGCATGCGATTTCCGTGCTGGCCATCGCGATGGTCGTGGTGTTTTTCGTGACGTCGGCCGATTCGGGCGCGCTGGTGGTGGACCTGCTGGCGTCGGGCGGCGTCGAGCCTTCGCCGGTATGGCAGCGCATCTTCTGGTCGGTCCTGACCGGCGTGGTGGCGGTGGCCCTGTTGCTGGCCGATGGCCTGCAGGCGTTGCAGACCGCGACCATCGCCAGCGCGCTGCCGTTCTCCATCGTGCTGCTGGTCTCGGTGTGGGGGCTGTTCAAGGCCTTGAAGCTTGACGCCACCAAGCGCCGCATCCACCATCAGTCACTGGCGCTGTCACGGCCGGCCGGGGGCGGGGAACCCTGGGAATCGCGGCTGCGCAACATGGTCATGATGCCGCGCCGCGCCCACGTTCTGCGCTTTACCGCCGACGTGGTGCGGCCGGCCATGGAGGCCGTGGTGGAAGAGTTGCAGAAGCTGGGCTACGAAGCGCGCGTGCGCGATGGCGAGGACGGCGAGGTGGCGCTGGAGGTGGTGCACCAGGAGGCCCTGGATTTTTCCTACGCCGTGCGGCCGGAGTCTTTCGTGCGCCCCGGACTGACCGCCGCCGAGGTGCGCGACGAAGAGGGGCGCAAGTACTTCCGGGCCGAGGTCCACCTGCGCGAGGGAGGCCAGGACTACGACATCATGGGTTGGAGCCGCGACGCCGTGATCGGCGACATCCTGGACCAGTACGAGCGCCATCGCCATTTCCTGCACGTGGCGCGATAG
PROTEIN sequence
Length: 650
MKTTIDRPVFFTAAAFILALVACAVAVPRVVGDVFDTIQGWILTNVSWFYILAVAIILLSVVFMAVSRYGSIKLGPDHSEPDYRNFTWFAMLFSAGMGIGLMFFGVAEPIMHLVSPPVGEAGTVAAAREAMRITFFHWGLHAWSLYAIVALVLAYFSYRHNLPLTLRSALYPFIGDRIHGPIGNAVDIFAIISTVFGVATSLGLGVAQINSGLHHLFGTPVGTTTQIILIAIACGLATLSVASGLDRGIRILSEANLYLAVILLVFVLAVGPTIFLLQSFLQNIGAYLSDIVAKTFNLYAYQPTDWIGGWTLFYWGWWIAWSPFVGLFIARISRGRTIREFVLGVLLVPTGFTFLWMTVFGGSAIHLVLFEHLDSLADTVKADSSLALFAFLEHYPWGHAISVLAIAMVVVFFVTSADSGALVVDLLASGGVEPSPVWQRIFWSVLTGVVAVALLLADGLQALQTATIASALPFSIVLLVSVWGLFKALKLDATKRRIHHQSLALSRPAGGGEPWESRLRNMVMMPRRAHVLRFTADVVRPAMEAVVEELQKLGYEARVRDGEDGEVALEVVHQEALDFSYAVRPESFVRPGLTAAEVRDEEGRKYFRAEVHLREGGQDYDIMGWSRDAVIGDILDQYERHRHFLHVAR*