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scnpilot_p_inoc_scaffold_128_31

Organism: SCNpilot_P_inoc_Burkholderiales_62_9

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: comp(32146..32565)

Top 3 Functional Annotations

Value Algorithm Source
Flagellar basal body rod protein FlgB n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CXV6_VARPS similarity UNIREF
DB: UNIREF100
  • Identity: 53.6
  • Coverage: 138.0
  • Bit_score: 139
  • Evalue 2.50e-30
flagellar basal-body rod protein FlgB similarity KEGG
DB: KEGG
  • Identity: 52.9
  • Coverage: 138.0
  • Bit_score: 138
  • Evalue 2.00e-30
Flagellar basal body rod protein FlgB {ECO:0000256|PIRNR:PIRNR002889}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variov similarity UNIPROT
DB: UniProtKB
  • Identity: 52.9
  • Coverage: 138.0
  • Bit_score: 138
  • Evalue 1.00e-29

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 420
GTGATCAGCCGCATCGGCGACGAATTGATGTTCAACGCGCAAGCCCTGGAGCTGCGCGCCCGCCGCCAGGAGGTCCTGGCGGCCAACCTGGCCAATGCCGAGACGCCCAACTACAAGTCGCGGGACTTCGATTTCGGCACCGCGCTGCGGGCCGCCACGGGCGCGCCCGCGCCGGATGCCGCGCAGGCGCCGCTGCGGATGTCGGCCACGGATGCCCGGCATCTGCGGGGCGATGCCGGGGACGGCCTGCCGGTGGCATTGAAGTACCGCACGCCCGCACAGGCCTCGATCGACGGCAACACCGTCGATCCCGACCTGGAGCGCACGCGGTTCGCCGACAACGCGCTGCGCTACGACGCCGCGCTGCGCATGCTGAACGGGCAGATACAAACGCTCCAGCGCGCGATCCAGAACAACTGA
PROTEIN sequence
Length: 140
VISRIGDELMFNAQALELRARRQEVLAANLANAETPNYKSRDFDFGTALRAATGAPAPDAAQAPLRMSATDARHLRGDAGDGLPVALKYRTPAQASIDGNTVDPDLERTRFADNALRYDAALRMLNGQIQTLQRAIQNN*