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scnpilot_p_inoc_scaffold_128_220

Organism: SCNpilot_P_inoc_Burkholderiales_62_9

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: comp(219503..219706)

Top 3 Functional Annotations

Value Algorithm Source
Cold shock-like protein n=8 Tax=Bordetella RepID=K0M918_BORPB similarity UNIREF
DB: UNIREF100
  • Identity: 73.1
  • Coverage: 67.0
  • Bit_score: 110
  • Evalue 5.90e-22
Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:KCB43661.1}; TaxID=1331257 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordete similarity UNIPROT
DB: UniProtKB
  • Identity: 74.6
  • Coverage: 67.0
  • Bit_score: 112
  • Evalue 2.80e-22
cspA; cold shock-like protein similarity KEGG
DB: KEGG
  • Identity: 73.1
  • Coverage: 67.0
  • Bit_score: 110
  • Evalue 1.70e-22

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Taxonomy

Bordetella hinzii → Bordetella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 204
ATGGCGACAGGCATCGTTAAATGGTTCAACGACGACAAGGGGTACGGGTTCATCATGCCGGATGATGGGGGGAAGGATTTGTTCGCCCACTTCTCGGAAATCCAGGCCGAAGGCCGCAAGACGCTGTACGAAAACCAGAAGGTGAGCTTTGAGGCCGTGCAGGGTCCGAAGGGCCCGCAGGCTTCCAAGATCCGCATCCTGTAA
PROTEIN sequence
Length: 68
MATGIVKWFNDDKGYGFIMPDDGGKDLFAHFSEIQAEGRKTLYENQKVSFEAVQGPKGPQASKIRIL*