ggKbase home page

scnpilot_p_inoc_scaffold_201_8

Organism: SCNpilot_P_inoc_Burkholderiales_62_9

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: comp(6667..7206)

Top 3 Functional Annotations

Value Algorithm Source
MarR family transcriptional regulator n=1 Tax=Variovorax paradoxus RepID=UPI0003736074 similarity UNIREF
DB: UNIREF100
  • Identity: 52.8
  • Coverage: 161.0
  • Bit_score: 152
  • Evalue 3.60e-34
MarR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 49.7
  • Coverage: 165.0
  • Bit_score: 152
  • Evalue 1.30e-34
Regulatory protein MarR {ECO:0000313|EMBL:ADU38285.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus ( similarity UNIPROT
DB: UniProtKB
  • Identity: 49.7
  • Coverage: 165.0
  • Bit_score: 152
  • Evalue 6.60e-34

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 540
ATGTCCTTCGAGCAGCCCGCAAATTGCGAGGAACTCCTGAACTACCGGATCGCGAGGCTGCTGTCGGTCAGCGGGGCGCTGGTGATCCGCTTGTGCGAAGGCCGCTACGGCATCAGCCGGCGGGAATGGCGCCTGATCGCGATGCTGGCCGACTACGGCACGCTGGCGCCTTCCGAACTGGCCGAACACGCGCATACCGACCGGCCCCTCGTGTCCCGCGCCATCAGCGACCTCGTCGCCAAGGGGCTGGTGTCGCGGGTCGGCCGCAGCAGCGACCGGCACCGCGTGGCCATCGAGCTGACTGACAAGGGCAGGGCCCTGCACGCCGAGCTGTTTCCCATCACCGCCGACATCAACGGCCGCGTCCTGCAAGCGCTGGGGCCGGAAAGGATCAGGGAGCTCGACGACATGCTGAATGTCCTGACCCACACGGCCGAACAGCTCAACCAGGACTACCCGCTGAAGGAAAAGGCCGATCGCCGGAACGGCGGCAGCCGCCAGTGGACCTCGTCGAAGCCGGACCTGGCGGGCGTCTGGTAG
PROTEIN sequence
Length: 180
MSFEQPANCEELLNYRIARLLSVSGALVIRLCEGRYGISRREWRLIAMLADYGTLAPSELAEHAHTDRPLVSRAISDLVAKGLVSRVGRSSDRHRVAIELTDKGRALHAELFPITADINGRVLQALGPERIRELDDMLNVLTHTAEQLNQDYPLKEKADRRNGGSRQWTSSKPDLAGVW*