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scnpilot_p_inoc_scaffold_201_19

Organism: SCNpilot_P_inoc_Burkholderiales_62_9

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: 16655..17194

Top 3 Functional Annotations

Value Algorithm Source
leuD; 3-isopropylmalate dehydratase small subunit (EC:4.2.1.33); K01704 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria similarity UNIPROT
DB: UniProtKB
  • Identity: 42.3
  • Coverage: 168.0
  • Bit_score: 147
  • Evalue 2.10e-32
leuD3; 3-isopropylmalate dehydratase small subunit LeuD (EC:4.2.1.33 4.2.1.35) similarity KEGG
DB: KEGG
  • Identity: 34.5
  • Coverage: 165.0
  • Bit_score: 107
  • Evalue 4.90e-21
3-isopropylmalate dehydratase small subunit LeuD n=1 Tax=Octadecabacter antarcticus 307 RepID=M9RFY4_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 34.5
  • Coverage: 165.0
  • Bit_score: 107
  • Evalue 1.70e-20

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Taxonomy

R_Betaproteobacteria_62_17 → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 540
ATGAACTGGATACAACGCGGTACCGCCCACGTGCTGGGCCATGACGTTCCCCACGACGGCGCGGTCATGGCGTTCGACATCGTGCTTTCCCGCAACACGAATCCCGACGAACTGATCCCGCACCTCTTCGCCGAACTCGATCCAGGCCTGGTCGGCCGCATCCGCTCCGGCGACCTGATCGTCGCCGGCGGCAACTTCCTGGCCGGCAAGGCGCACAACGCCGGCATCATCGCCATGAAGGCGCTGGGCCTGGGCATCCTGTGCGAATCCATGTCGGTGCGCGCCTTCCAGGGCGTGGTCGCGCTGGCCGTCCCCACGCTCGCCTCTTGCCACGGCATCGCGGACGCGCTGTGCGACGGCGACGAGATCGAAGTGGACTACGCCAACGGCACCGTCACCCGATGCGCCACCGGCGAGATCCACCATTACCCTCCCCTGGCGCCCGAGATACGCGCCATGATCGGAAACGGCGGCATGCGCGGCGCGCTCCTGGCCCATCTGCGCGCGCATCCCGAACTCGGCCAACCCTACGCGGAGTAG
PROTEIN sequence
Length: 180
MNWIQRGTAHVLGHDVPHDGAVMAFDIVLSRNTNPDELIPHLFAELDPGLVGRIRSGDLIVAGGNFLAGKAHNAGIIAMKALGLGILCESMSVRAFQGVVALAVPTLASCHGIADALCDGDEIEVDYANGTVTRCATGEIHHYPPLAPEIRAMIGNGGMRGALLAHLRAHPELGQPYAE*