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scnpilot_p_inoc_scaffold_237_10

Organism: SCNpilot_P_inoc_Burkholderiales_62_9

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: comp(8430..10301)

Top 3 Functional Annotations

Value Algorithm Source
Protein translocase subunit SecD n=1 Tax=Bordetella bronchiseptica 253 RepID=K4QKT7_BORBO similarity UNIREF
DB: UNIREF100
  • Identity: 75.5
  • Coverage: 624.0
  • Bit_score: 923
  • Evalue 8.90e-266
  • rbh
secD; protein-export membrane protein similarity KEGG
DB: KEGG
  • Identity: 75.5
  • Coverage: 624.0
  • Bit_score: 923
  • Evalue 2.50e-266
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=1208660 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetel similarity UNIPROT
DB: UniProtKB
  • Identity: 75.3
  • Coverage: 624.0
  • Bit_score: 923
  • Evalue 1.60e-265

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Taxonomy

Bordetella parapertussis → Bordetella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1872
ATGAATCGCTATCCTCTCTGGAAGTACATCATGATCGCCGTGGTGGTCGTGATCGGCTTCGTCTACACCCTGCCGAATTTCTTCGGCGAGTCCCCCGCCGTCCAGGTCTCCAGCGCCAAGGCGACCATCAAGGTCGACAACTCCATGATGGAGCGGGTGGACCAGACCCTGCAGGCCGCGGGCATCTCCAACACCGGCCTGTACTTCGAGCAGAACGGCCCGGTGGGCACGGTGCGGGTGCGCCTGAACACCCCGGACCAGCAGCTGCGCGCACGCGACCTGCTCGAGAAATCGCTGAACCCCGACTCGTCCGACCCCGGCTACGTGGTCGCGCTGAACCTGCTGTCGGCCTCGCCCGCCTGGCTGCGCTCGCTGCACGCGCTGCCCATGTACCTGGGCCTGGACCTGCGCGGCGGCGTGCACTTCCTGCTGCAGGTGGACATGAAGGGCGCGCTGACCAAGCGCTACGACGCCATGACCGGCGACGTGCGCTCGTTGCTGCGTGACAAGAACATCCGCCACAACGGCATCGACCGCGTCGGCCAGAGCATCGAGATCAAGTTCCGCGACGCCGCCACCCGCGATGCCGCGCGCGACGTGCTGCGCAATGGCCTGCCCGACCTGCAGCTCAGCGACCAGGACGCCGGCGGCGACTTCAAGCTGACCGGCGCCCTGACCCCGCAGGCCATCAAGACCTCGCAGGACAACGCGCTGCGCCAGAACATCACGACGCTGCACAACCGTATCAACGAACTGGGCGTGGCCGAGCCGGTCATCCAGCAGCAAGGCGCCGACCGCATCGTGGTCCAGTTGCCGGGCGTGCAGGACGTGGCCAAGGCCAAGGACATCCTGGGCCGCACCGCCACGCTGGAAGTGCGGATGGTGGACGATTCGCCGGAAGCCACCAGCGCGCTGGCCAGCGGCACCGTGCCCTTCGGCCTCGAACGCTACACCGATCGCGACGGCCGGCCTGTGCTGGTTCGCCGCCAGGTCGTGCTGACCGGCGAGAACCTGCAGGACGCCCAGGCCGGCTTCGACGGCCAGACCCAGCAGCCCGCCGTACACCTGACGCTGGACGCCAAGGGCGCCCGCATCTTCCGCGACGTGACCCGCGACAACGTGGGCAAGCGCATGGCCATCCTGCTGTTCGAGAAGGGCAAGGGCGAAGTCGTGACCGCGCCCGTGATCCGCACCGAGATCAGCGGCGGCCGCGTGCAGATCTCCGGCAGCATGACCACGGTCGAGGCCAACGACACCGCCCTGCTGCTGCGCGCCGGTTCGCTGGCCGCGCCCATGGAGATCATCGAGGAACGCACCATCGGCCCCAGCCTGGGCGCCGACAACATCGAGAAGGGCTTCCACTCGGTGGTCTACGGCTTCGCCGCCATCGCCATCTTCATCGTCCTGTACTACGGGCTCTTCGGCGTGTTCTCGGTGATCGCGCTGGCAGTCAACCTGCTGCTGCTGATCGCGCTGCTGTCCATGCTGCAGGCCACGCTGACCCTGCCGGGCATCGCCGCCATCGCGCTCACGCTGGGCATGGCGATCGACGCCAACGTGCTCATCAATGAACGGATACGCGAGGAACTGCGTGCCGGCGCCGCGCCGCAACAGGCTATCCATCTGGGCTTCGAACGCGCCTGGGGCACCATCCTGGACTCCAACGTCACCACGCTGATCGCGGCGGTGGCGCTGCTGGCCTTCGGTTCGGGTCCGGTCCGGGGCTTCGCCATCGTCCATACCATCGGGATCCTGACCTCGATGTTCTCCGCCGTGGTCGGCGCCCGCGCGCTCGCCAACCTCTGGTACGGCCGCCGCAAGAAACTCGCCAAGCTGTCGATTGGCCAGGTCTGGAAACCCAAGGAGGTCTGA
PROTEIN sequence
Length: 624
MNRYPLWKYIMIAVVVVIGFVYTLPNFFGESPAVQVSSAKATIKVDNSMMERVDQTLQAAGISNTGLYFEQNGPVGTVRVRLNTPDQQLRARDLLEKSLNPDSSDPGYVVALNLLSASPAWLRSLHALPMYLGLDLRGGVHFLLQVDMKGALTKRYDAMTGDVRSLLRDKNIRHNGIDRVGQSIEIKFRDAATRDAARDVLRNGLPDLQLSDQDAGGDFKLTGALTPQAIKTSQDNALRQNITTLHNRINELGVAEPVIQQQGADRIVVQLPGVQDVAKAKDILGRTATLEVRMVDDSPEATSALASGTVPFGLERYTDRDGRPVLVRRQVVLTGENLQDAQAGFDGQTQQPAVHLTLDAKGARIFRDVTRDNVGKRMAILLFEKGKGEVVTAPVIRTEISGGRVQISGSMTTVEANDTALLLRAGSLAAPMEIIEERTIGPSLGADNIEKGFHSVVYGFAAIAIFIVLYYGLFGVFSVIALAVNLLLLIALLSMLQATLTLPGIAAIALTLGMAIDANVLINERIREELRAGAAPQQAIHLGFERAWGTILDSNVTTLIAAVALLAFGSGPVRGFAIVHTIGILTSMFSAVVGARALANLWYGRRKKLAKLSIGQVWKPKEV*