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scnpilot_p_inoc_scaffold_237_111

Organism: SCNpilot_P_inoc_Burkholderiales_62_9

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: 122712..124133

Top 3 Functional Annotations

Value Algorithm Source
MATE efflux family protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V885_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 67.8
  • Coverage: 447.0
  • Bit_score: 619
  • Evalue 3.60e-174
Variovorax paradoxus strain MEDvA23 contig_58, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ26840.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona similarity UNIPROT
DB: UniProtKB
  • Identity: 68.5
  • Coverage: 447.0
  • Bit_score: 624
  • Evalue 1.20e-175
mate efflux family protein similarity KEGG
DB: KEGG
  • Identity: 67.8
  • Coverage: 447.0
  • Bit_score: 619
  • Evalue 1.00e-174

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1422
ATGTCCATCGATCCGCGCACGCGCCGCCTCATCGAGGCCCCCATCGTTTCCACGCTGCTGCGGCTGGCGGTGCCCAACACGCTGGTGCTGGCCGCTCAGGCCAGCGCAGGCATCATCGAGACCTATTTCGTCGGAAAGCTCGGCACCGACGCGCTGGCCGGCGTGGCTCTGGTGTTTCCGACCGTCATGTTGATGCAGATGCTGTCCGGCGGCGCGGTGGGAGGCGGTATTTCCTCGTCGATCGCCCGGGCGCTGGGAGGCGGCCGGCGCGAGGATGCCGATTCGCTGGTCCGCCACGCGATCGTGGTGGGATTGCTGTTCAGCCTGTTCTTTACGGTGGCCGGGCTGGCGGGCGGCCGCTGGCTGTACGGACACATGGGCGGCTCGGGGGGCTCGCTCGAGGCGGCGCTGGAGTATTCGCGCTGGATCTTCGGCGCGGCGGCGCTGGTGTGGCTGTTCAATTCGCTGGCGTCGGTCGTGCGCGGCACTGGCAACATGAGCCTGCCCGCGGCGGTCACCTGTGCGGGGACAGCGATGCTGGTGCCGTTGTCGCCCCTGCTGATCTTCGGCTGGGGACCGGTGCCGGGCCTGGGCGTGGCCGGCGGAGCCATTGCGCTGGTGGTCTACTATGCCGCGGGAAGCGTCGCGCTGCTGGCCTTTCTTTGTTCGGGCCGCGGCATCGTCCGCCTGTCCTGGAAGGGCTGGACGCTGCGCTGGCCGCTTTTCCGCGACATCCTTCGCGTGGGGCTGGTCGCCGCGGTTTCCACGGTGGCGATCAACATCGCCATCAGCATCGCCACTGCGCTGACCGGCCATTTCGGCCCGGCCGCTATCGCGGGCTACGGCACTGGCTCGCGCCTGGAATACTTGCTCGTGCCACTGGTATTCGGCCTGGGCGGTCCCATGGTCGTCATGGTGGGCGCGGCGATGGGGGCGGGCCGGCACGACCGGGCGCTGCGCATCGCCTGGGTCGGCGCGGGATGCGCCTTCGTCGTGGCGGAGGCCATAGGCCTGGCGGCCGCTTCTTTCCCTCACACCTGGCTGTCGATGTTCGGCAGCGAGCCCGACATGCTGGCCACCGGATCGCTCTATCTGCGCATCGTGGGGCCTGTCTATGGGTTTTTTGGCGCGGGGCTGGCGCTCTACTTCGCATCGCAGGGCGCGGGGCGGCTGCTGTGGCCGGTGACCGGCAGCGTCGTGCGCCTGGCCCTGAGCGCGATCGGCGGGATGGCCGCGATCGCGGCGGGGATGGGGCTGGCGGGGGTTTTCGCGGCTCAGGCGCTGGCGCTGGTGGTCTACGGCGCCATCAATGCGGTTGCCATTGCGCGTGGTGCATGGTTTGGCGGACGCCGCCGTGCCGCGCGAAGAAGCCGCAAAGCTGGCGCCCCAGGAAGTCCTCGCCCGTGTCGAAGTGGGCCATGA
PROTEIN sequence
Length: 474
MSIDPRTRRLIEAPIVSTLLRLAVPNTLVLAAQASAGIIETYFVGKLGTDALAGVALVFPTVMLMQMLSGGAVGGGISSSIARALGGGRREDADSLVRHAIVVGLLFSLFFTVAGLAGGRWLYGHMGGSGGSLEAALEYSRWIFGAAALVWLFNSLASVVRGTGNMSLPAAVTCAGTAMLVPLSPLLIFGWGPVPGLGVAGGAIALVVYYAAGSVALLAFLCSGRGIVRLSWKGWTLRWPLFRDILRVGLVAAVSTVAINIAISIATALTGHFGPAAIAGYGTGSRLEYLLVPLVFGLGGPMVVMVGAAMGAGRHDRALRIAWVGAGCAFVVAEAIGLAAASFPHTWLSMFGSEPDMLATGSLYLRIVGPVYGFFGAGLALYFASQGAGRLLWPVTGSVVRLALSAIGGMAAIAAGMGLAGVFAAQALALVVYGAINAVAIARGAWFGGRRRAARRSRKAGAPGSPRPCRSGP*