ggKbase home page

scnpilot_p_inoc_scaffold_237_245

Organism: SCNpilot_P_inoc_Burkholderiales_62_9

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: comp(265813..266343)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Comamonas testosteroni RepID=UPI0002DB30F5 similarity UNIREF
DB: UNIREF100
  • Identity: 81.6
  • Coverage: 174.0
  • Bit_score: 281
  • Evalue 6.60e-73
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 81.6
  • Coverage: 174.0
  • Bit_score: 280
  • Evalue 2.40e-73
RNA polymerase sigma factor {ECO:0000313|EMBL:AIJ46527.1}; TaxID=1392005 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testoste similarity UNIPROT
DB: UniProtKB
  • Identity: 81.6
  • Coverage: 174.0
  • Bit_score: 280
  • Evalue 1.20e-72

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Comamonas testosteroni → Comamonas → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 531
GTGTCCCGACCTGCCGACAGTGCCGCCAGTCATGCGCTCGGCAGCCTCTATACCCAGCACAGCCAGTGGCTGGTTGCCTGGCTGCAACGAAAGCTGGGAAACCGCTCCGACGCCGCGGACATCGCCCAGGACACCTTCACCCGCATCTGGGCGGGCGCCAGGACTCAGGCCATCCAGGACATCCGCGAACCTCGGGCCTACCTGACGACCGTGGCCAAGCGCCTGGTCATCAACCACCTCGAACGCCAGTCGCTGCAACAGGCCTACCTGGCATCCCTGCACCTGCTGCCCGAGAACACCGTGCCGTCGGTGGAGGCCCGGGCGATCCTGCTGGAAACGCTGGAGCAACTGGACGCGCTGCTGGACGAGCTGCCGGCCAAGGCCCGCACGGCCTTCCTGCTTTCCCAGCTCGAAGGCCTGTCCTACGAGGAAATCGCCGCGCACATGCAGGTCAGCGTGCGCACGGTCACCCGCTACATGGCACAGGGCTTCAGGCAATGCCTGCAGGTCATGCTGGTCTCCGGCGCATGA
PROTEIN sequence
Length: 177
VSRPADSAASHALGSLYTQHSQWLVAWLQRKLGNRSDAADIAQDTFTRIWAGARTQAIQDIREPRAYLTTVAKRLVINHLERQSLQQAYLASLHLLPENTVPSVEARAILLETLEQLDALLDELPAKARTAFLLSQLEGLSYEEIAAHMQVSVRTVTRYMAQGFRQCLQVMLVSGA*