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scnpilot_p_inoc_scaffold_237_272

Organism: SCNpilot_P_inoc_Burkholderiales_62_9

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: 292454..293446

Top 3 Functional Annotations

Value Algorithm Source
MFS transporter n=1 Tax=Variovorax paradoxus RepID=UPI000375C3E1 similarity UNIREF
DB: UNIREF100
  • Identity: 69.4
  • Coverage: 330.0
  • Bit_score: 462
  • Evalue 3.90e-127
  • rbh
putative Bug-like extra cytoplasmic solute receptor, TTT family similarity KEGG
DB: KEGG
  • Identity: 69.3
  • Coverage: 322.0
  • Bit_score: 454
  • Evalue 3.00e-125
Putative Bug-like extra cytoplasmic solute receptor, TTT family {ECO:0000313|EMBL:AGU49154.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Var similarity UNIPROT
DB: UniProtKB
  • Identity: 69.3
  • Coverage: 322.0
  • Bit_score: 454
  • Evalue 1.50e-124

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 993
ATGACGAAGAGACACGACAACCGCCGCCGGATGGCGCTGAGCGCGGCGTTAGGCCTCGCGGCCGTGCTGGCCGGCCAGGCTTGCATGGCGCAGGCCTGGCCTTCCAGGCCGATCAAGATGGTGATCCCCTACACCCCGGGCGGATCGATCGATACCGTGGGAAGGCTGGTCGCCGAACAACTGCAGAAGCAACTGGGCCAGCCCATCGTGATCGAGAATCACGCGGGCGCCTCGGGCCTCATCGGTTCGGCGGCGGTCCAGCGCGCCAAGGCGGACGGCTATACGCTGCTGTTCAATGCTTCCAGCCAGATCTACATGCCGCTGGTGGTGTCCAAACCCACCTACGACGCGGAGAAGGATTTCACGCCGGTGGCGCAGATCGGCTATGTCCCGCTCGTCGTGGCGGTGGGCAACGACGTGCCCGCCAAGACGCTGGGCGAGCTTGCGCAACTGGCTAAAACGTCGCCGGGAAAGTACACCTGGGCGACCTCGGGCCTGGGCACCACCAGCCATCTGAGCGAGGAAATGGTCAATCGCGCGCTGAAGCTGGACATGGAGATCGTGGCCTACAAGGGTGCGGTCCCGCAATTGACCGACGTGGTGGGCGGGCACGTCTCGGCGGCGATATCGCCCATGCCGGGTGTGCATCCCTTCGTCGCCGGCGGGCGCCTGCGCGCCATCGCGGTGACGAGCAAGAAGCGGGTGGCCCAGATGCCCGACGTGCCGACGGTGGCCGAAAGCGGCATTCCCGATTTCGAGGTGCTGTCCTGGTACGGGATCTGGGGACCGGCCGGCATGCCCGCGGACGTGGTCGCGACGCTGAACCGGGAAGTGGCGCGGGCGGTCGGGACGGCCGGGTTGAAGGCTCGCTTCAACGACCTGTCCTTCGTTCCCACGCAATCCTCGCCCGAGGAATTTCGCGCCATGATCCGCCAGGACATCGTGTCCATCGGCAAGGCGGTGAAGGAAGCCAACATCAGGATTTCCTTCTGA
PROTEIN sequence
Length: 331
MTKRHDNRRRMALSAALGLAAVLAGQACMAQAWPSRPIKMVIPYTPGGSIDTVGRLVAEQLQKQLGQPIVIENHAGASGLIGSAAVQRAKADGYTLLFNASSQIYMPLVVSKPTYDAEKDFTPVAQIGYVPLVVAVGNDVPAKTLGELAQLAKTSPGKYTWATSGLGTTSHLSEEMVNRALKLDMEIVAYKGAVPQLTDVVGGHVSAAISPMPGVHPFVAGGRLRAIAVTSKKRVAQMPDVPTVAESGIPDFEVLSWYGIWGPAGMPADVVATLNREVARAVGTAGLKARFNDLSFVPTQSSPEEFRAMIRQDIVSIGKAVKEANIRISF*