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scnpilot_p_inoc_scaffold_237_289

Organism: SCNpilot_P_inoc_Burkholderiales_62_9

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: 315100..316215

Top 3 Functional Annotations

Value Algorithm Source
ABC-type multidrug transport system, permease component n=1 Tax=Variovorax sp. CF313 RepID=J2K674_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 72.0
  • Coverage: 372.0
  • Bit_score: 525
  • Evalue 5.50e-146
  • rbh
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. C similarity UNIPROT
DB: UniProtKB
  • Identity: 72.0
  • Coverage: 372.0
  • Bit_score: 525
  • Evalue 7.70e-146
putative ABC-2 type transporter, permease protein similarity KEGG
DB: KEGG
  • Identity: 69.9
  • Coverage: 372.0
  • Bit_score: 519
  • Evalue 8.50e-145

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1116
ATGGATGACTTCATCGACTTCTGGCGACGCCTGGCCCAGCTGTGCCGCAAGGAATTACTGGCCATCCTGAAGGACCCCGCCAACCGGGCCATCCTGGTCGTGCCCGCTTTGCTCCAGAGTTTCGTGTTCGGCTATGCCGCGACCTACAACCTGACGAACGTGCCGTACGCGGTGCTGGACCAGAGCCAGGGCGCGGCGTCGGCCCGGCTGCTGGCGCGCCTGGACGGCACCGGGGTCTTCCACCGCGTGGCCACGCTGACGGCGCCCCGGGACATCGCGCGCGTGGTGGATGCCGGCGACGCGCTACTGGTCCTGCAATTCGGGCCGGACTTCGAGGCGCGGCTGGCGCAGGGGCAGGAGGCCCCCTTGCAGGTCATCCTGGATGGCCGCAACTCGACCACCGCCGGCCAGGCATCCGCCCACGTCGCCGAGATCGTGGCGGCCTACAACGCCGAGCTGCGCGGCGGCGGGATGCCGGTCACCGCCGTGCCGCGCGTCTGGTACAACCCCAATCTCGAGACGCGCTGGAACATCATGCCGGCGCTGATCGCCGCGCTCAGCATGATGCAGACCCTGATGCTGACCGCGCTCTCGGTCGCGCGCGAGCGCGAGCAGGGCACCTTCGACCAGTTGCTGGTGACGCCCTACACGCCCATGGAAATCATGCTGGGGAAGGCCGTTCCGCCGGTCCTGATCGGCCTCGTGCAATCGTCCATCATCCTGTGCGTCGCGCTGTTCTGGTTCCGCATCCCCATGGCCGGATCGCTGGCGACGCTTTACGCGGGCCTGGCGATCTTCACCGTGGCCTGCGTGGGAATCGGGCTGTCCATCTCGGCGGTCTCGGTCAACATGCAGCAGGCCATGCTCTATACCTTCGTGCTGATCATGCCGCTGATGCTGCTGTCGGGCCTGGCCACGCCGGTGCGCAACATGCCCGATCCCCTGCAGGTCGCGACCCTGGCGAACCCGCTGCGCTTCGCCATCGACCTCGTGCAGCGGGTGTATCTGGAAGGCGCCGGCCTGCTGTCGCTGTGGCGCAATCTCGTGCCCATGTTCGTCCTGGGCGCGGTGACGCTGCCGCTGGCGGCGTGGCTGTTCCGCCATCGTCTGGTTTGA
PROTEIN sequence
Length: 372
MDDFIDFWRRLAQLCRKELLAILKDPANRAILVVPALLQSFVFGYAATYNLTNVPYAVLDQSQGAASARLLARLDGTGVFHRVATLTAPRDIARVVDAGDALLVLQFGPDFEARLAQGQEAPLQVILDGRNSTTAGQASAHVAEIVAAYNAELRGGGMPVTAVPRVWYNPNLETRWNIMPALIAALSMMQTLMLTALSVAREREQGTFDQLLVTPYTPMEIMLGKAVPPVLIGLVQSSIILCVALFWFRIPMAGSLATLYAGLAIFTVACVGIGLSISAVSVNMQQAMLYTFVLIMPLMLLSGLATPVRNMPDPLQVATLANPLRFAIDLVQRVYLEGAGLLSLWRNLVPMFVLGAVTLPLAAWLFRHRLV*