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scnpilot_p_inoc_scaffold_416_16

Organism: SCNpilot_P_inoc_Burkholderiales_62_9

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: comp(12700..13026)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI0003767928 similarity UNIREF
DB: UNIREF100
  • Identity: 81.5
  • Coverage: 108.0
  • Bit_score: 180
  • Evalue 9.80e-43
RNA polymerase subunit sigma-24 {ECO:0000313|EMBL:KHS00252.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnom similarity UNIPROT
DB: UniProtKB
  • Identity: 80.6
  • Coverage: 108.0
  • Bit_score: 179
  • Evalue 3.00e-42
RNA polymerase subunit sigma-24 similarity KEGG
DB: KEGG
  • Identity: 78.7
  • Coverage: 108.0
  • Bit_score: 175
  • Evalue 6.70e-42

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Taxonomy

Pandoraea pnomenusa → Pandoraea → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 327
ATGACGTGGCTTATCGCACTGGCTCGCAATCGCACCATTGATCGCTTGCGTGAACATCGTGAGGCTGCGCTGGACGACGATGATGCGCTTGCCATTCCCTCCGATGAGCCCACGCCTTCGATGCTCGCGGAAGCCAGCGAAGATCGACGCCGCCTCGACCACTGTATGCAACGGCTCGAACCGCAGCAGCGGCGCGCAGTTCGCGACGCATTTTTTGGCGGGGAAAGCTACAGCGAGCTCGCGACCAGGCTATGTGTCCCGCTCGGGACGATGAAGAGCTGGATACGCCGTAGCTTGCAACAACTCAAGCTGTGCCTGGAGCAATGA
PROTEIN sequence
Length: 109
MTWLIALARNRTIDRLREHREAALDDDDALAIPSDEPTPSMLAEASEDRRRLDHCMQRLEPQQRRAVRDAFFGGESYSELATRLCVPLGTMKSWIRRSLQQLKLCLEQ*