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scnpilot_p_inoc_scaffold_416_63

Organism: SCNpilot_P_inoc_Burkholderiales_62_9

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: comp(62374..63693)

Top 3 Functional Annotations

Value Algorithm Source
Type II/IV secretion system secretin, associated with Flp pilus assembly n=1 Tax=Collimonas fungivorans (strain Ter331) RepID=G0AIA5_COLFT similarity UNIREF
DB: UNIREF100
  • Identity: 57.9
  • Coverage: 442.0
  • Bit_score: 483
  • Evalue 1.70e-133
  • rbh
Type II/IV secretion system secretin RcpA/CpaC similarity KEGG
DB: KEGG
  • Identity: 59.2
  • Coverage: 434.0
  • Bit_score: 504
  • Evalue 2.60e-140
Type II/IV secretion system secretin RcpA/CpaC {ECO:0000313|EMBL:AIY40107.1}; TaxID=279058 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" sourc similarity UNIPROT
DB: UniProtKB
  • Identity: 59.2
  • Coverage: 434.0
  • Bit_score: 504
  • Evalue 1.30e-139

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Taxonomy

Collimonas arenae → Collimonas → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1320
ATGAAAATCAGCAATCAGGCTTTCGTGCGGCGCCTGGCGCCCCTGGCCATGGCTTTGTCGCTGTCCTTCGCCGTGCCGGCCGGCGCGGCCGACGAGGGCGGTCCGCGCCAGATATCGGTGGCGGTGCGCGATCAATACCAACTCAGCATTCCTGGCAACCTGGAGCGCGTATCGGTGGTCGATCCCGAAGTGGCCGACGTCGTGATCCAGAAGGGCAGCGGCGGCCGCAAGGGTGGGGTGCTGGTGGTGGGCAAGAAGCCTGGCACCACCATGGTGTCGGTTTGGCAGCGGGGCGCCGCGGCGCCCCAGGCCTATCTGGTCCGCGTGACGGGCGACCTGGCCACGCTGCTGGGCGAGGGGGACGGTGCCAAGGCCCAGGTCTACGGGGAAGCGGCTGTGTTGAGCGGACAGTCACCGTCGATGCTGTCGCATCATCGTGCCGCGGCCGCGGCCAGCGACGCTGTGGGGGGCGAAAACGTATTTGATGCTTCCACCATCGAGACCGGCGGCGTGGTCCAGGTGGAAGTCAAGGTCGTGGAGTTCAGCAAGCAGGTGATGAAGGAAGCCGGCTTCAATTTTTCTGCCTCCAATCGACGTGGCAGCTTCAGCTTCGGTCTGGCCAGCGACCTGGCGCCTACCGGCAAGGCTTTTGATCTGACTCTGGGGTTGAGCCGCGGCAATTTCCTGCTCGACACGAACCTGCGTCTGCTCGAAACCAACGGCCTGGCGCGCGTGCTGGCCGAGCCGACGCTGGTTGCCTTGTCTGGCCAGAGCGCCAAGTTCCTGGCCGGCGGCGAGCTGCCAGTGCCGCAGGCCGGCGGGCTGGGGACGACCACAGTCATGTACAAGCCGTTCGGCATCGGGCTGACGCTGACGCCCACGGTGCTGGCCAAGGACCGGATCGCGCTCAAGGTCGCACCCGAGGCGAGCGACCTGGACTGGACCAACGGCATCACCCTCAACAACATCCAGATTCCCGCCATCATCACCCGTCGGGCCGACACCACGGTCGAACTCGGCGACGGCGAAAGCTTCGTGATCGGCGGACTGGTGTCGCGTTCCACCACCTCGAATCTGGACAAGCTGCCATTCCTGGGCGACCTGCCCATCATCGGTACCTTCTTCCGGAACATGAAGTATTCCCAGAAGGAAAAAGAACTGCTGATCGTCGTGACGCCGCATTTGGTCAAGCCCCTGGCCAAGGGCGTCAAGCCGCCCATGCCGGGCGCCAACGAGAAGCGTGACTCCGCGACCAATGCCTGGGGTCATTTCCTGCTGGGTGTCGCGAGCAATGATGAGTTGCCTGGTTTCTCGAAGTAG
PROTEIN sequence
Length: 440
MKISNQAFVRRLAPLAMALSLSFAVPAGAADEGGPRQISVAVRDQYQLSIPGNLERVSVVDPEVADVVIQKGSGGRKGGVLVVGKKPGTTMVSVWQRGAAAPQAYLVRVTGDLATLLGEGDGAKAQVYGEAAVLSGQSPSMLSHHRAAAAASDAVGGENVFDASTIETGGVVQVEVKVVEFSKQVMKEAGFNFSASNRRGSFSFGLASDLAPTGKAFDLTLGLSRGNFLLDTNLRLLETNGLARVLAEPTLVALSGQSAKFLAGGELPVPQAGGLGTTTVMYKPFGIGLTLTPTVLAKDRIALKVAPEASDLDWTNGITLNNIQIPAIITRRADTTVELGDGESFVIGGLVSRSTTSNLDKLPFLGDLPIIGTFFRNMKYSQKEKELLIVVTPHLVKPLAKGVKPPMPGANEKRDSATNAWGHFLLGVASNDELPGFSK*