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scnpilot_p_inoc_scaffold_397_55

Organism: SCNpilot_P_inoc_Burkholderiales_62_9

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: 59178..60098

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Variovorax sp. CF313 RepID=J3CQ50_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 59.9
  • Coverage: 299.0
  • Bit_score: 349
  • Evalue 2.60e-93
  • rbh
Transcriptional regulator {ECO:0000313|EMBL:EJL76264.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source=" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.9
  • Coverage: 299.0
  • Bit_score: 349
  • Evalue 3.70e-93
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 57.4
  • Coverage: 310.0
  • Bit_score: 339
  • Evalue 1.30e-90

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 921
ATGAATTTGACCGTGCGTCAGTTGCAGGCCTTCGTGCTGGTCTCGCGGCTGGGCAGCTTCACCAAGGCTGCCCACGCGATGCACGTCACGCAGTCGGCGCTCAGCCTGCTGGTCCGCGAACTGGAGACGGGACTGGGCACGCGGCTGGTCGACCGCACCACGCGCAGCGTCAGCGTCACTGCCGTCGGCCGGGAATTCCTGGCCAGCGCCGAGCGTATCCTGGACGACATCGGCCACGCCATCGCCAACGTCGACCAATGGGTGGCGCACCAGCGCGGGCGCGTGGTCGTGGCCGCGCCGCTGGTGCTGTCCGGCACGCTGCTGCCGCCGCTGGTCGCGGACTTCAGGGCCGGCCACCCCGGCATCGAACTCGTCTTGAAGGATTCACTGCCCGACGAGGTGCTGCCGCAGGTCCGCAGCGGCGCGGCCGACCTCGGCATAGGAACCTTCCGGCGCACCGAGGCCGAGTTGCAGCACACACAGTTGTTCGAGGAGTCGCTGGTCGCGATATTTCCGGTGGACCATCCGTTCGCCCGCGCGCGGCGCTTGCCCTGGGGCCGCCTGGAACGGGAACGCGTACTGACGCTGCCGCGCGGCAGCGTGTTCCGCGAACTGGCCGAGCGGGGCTGCAACGCGGCGGGCATGACGCTCGATCCGGCGGGGGAAGCGACCTACGTCGGCACGCTGATTGGATTGGTGTCGGCCGGACAAGGGGTGGGCATCGTGCCCGGCTACGCTACCGCGCTGGCCGACCCGCGGGTCATCGCCTGGAAACCGCTGCAGGACCCGGTCGTGCGGCGCGAGGTGTCGATCGTGCATCGCGCCACCGTGGCGGTCTCGCCGGCGGCCCAGGCCTTCATGGATTTCGTCCTGGGACACGCCGGCATCCGGCGGCTGCGCCGCACGTCCGCCAAGGATTGA
PROTEIN sequence
Length: 307
MNLTVRQLQAFVLVSRLGSFTKAAHAMHVTQSALSLLVRELETGLGTRLVDRTTRSVSVTAVGREFLASAERILDDIGHAIANVDQWVAHQRGRVVVAAPLVLSGTLLPPLVADFRAGHPGIELVLKDSLPDEVLPQVRSGAADLGIGTFRRTEAELQHTQLFEESLVAIFPVDHPFARARRLPWGRLERERVLTLPRGSVFRELAERGCNAAGMTLDPAGEATYVGTLIGLVSAGQGVGIVPGYATALADPRVIAWKPLQDPVVRREVSIVHRATVAVSPAAQAFMDFVLGHAGIRRLRRTSAKD*