ggKbase home page

scnpilot_p_inoc_scaffold_443_19

Organism: SCNpilot_P_inoc_Burkholderiales_62_9

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: 18059..18970

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0003191A4D similarity UNIREF
DB: UNIREF100
  • Identity: 63.4
  • Coverage: 306.0
  • Bit_score: 377
  • Evalue 1.50e-101
LysR family transcriptional regulator {ECO:0000313|EMBL:KIF81156.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="He similarity UNIPROT
DB: UniProtKB
  • Identity: 61.4
  • Coverage: 306.0
  • Bit_score: 376
  • Evalue 4.70e-101
transcription regulator protein similarity KEGG
DB: KEGG
  • Identity: 60.3
  • Coverage: 305.0
  • Bit_score: 364
  • Evalue 2.90e-98

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Herbaspirillum sp. TSA66 → Herbaspirillum → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 912
ATGGAAGCCAAGTGGCTCGAAGATTTCATCGCGCTGGCCGAAACCCGTTCGTTTTCGCGGGCGGCCGAGCTGCGACACATCACGCAGCCCGCCTTCTCGCGCCGTATCCAGGCCCTGGAGGCCTGGGTCGGCACCGACCTGGTCGACCGCGCGGTCTATCCCACCCGCCTGACGCCCGCCGGCGAGACCTTCCGCGCTGAAGCCATCGCCATGCTGGCCAAGCTGGACGAGACCCGGGCGATGCTGCGCGGCATGCGCCCCGCCTCGCAGGAAGTGATCGACTTCGCCGTGCCGCATACCCTGTCGCTGACCTTCTTCCCGCGCTGGCTGAGCCGCATCCGGGCCGAGGCCGGCCTGCCTGACTTCACGGCCCGCCTGATGGCGCTGAACGTCCACGACGCCGCGATCAGCCTGGTCCAGGGCGGCAGCGACCTCGTCATGGTCTATTACCATCCCCGCCAGCCGGTCCAGCTCGATCCGCGCCACTACGACATGCTGGTGCTGGGCAGCGAAGCGGTCTACCCCTACGCGCGCGGCAAGCCCGACGGCACGCCGGAGTACGTGCTGGGCGAGGGCGGTCCGGTGCCCTACCTGGCCTACGCGCCCAACGCCTACCTGGGCCGCATCGTCGACCTGATCCTGGCGGGCGCCCAGCCCCGGCCGCCGCTGGACGAGCGCTATGAAACCGACATGGCCGAGGGCTTGAAGGCCATGGCGCTCGAAGGCCACGGGGTGGCCTTCCTGCCCGAGAGCGCGGTCACCCGCGAGGTTGCCTCGCACCGCCTGGCCTGCGCCGGCGAGGCCTATACCGAGACCATGGAGATCCGGCTCTACCGCGAGCGGGCGCCGGCCGGCGGCCCCGCCAAGCCGCTGGTCGACGCCCTGTGGAATTACCTGTCGGGCGCGCGCTGA
PROTEIN sequence
Length: 304
MEAKWLEDFIALAETRSFSRAAELRHITQPAFSRRIQALEAWVGTDLVDRAVYPTRLTPAGETFRAEAIAMLAKLDETRAMLRGMRPASQEVIDFAVPHTLSLTFFPRWLSRIRAEAGLPDFTARLMALNVHDAAISLVQGGSDLVMVYYHPRQPVQLDPRHYDMLVLGSEAVYPYARGKPDGTPEYVLGEGGPVPYLAYAPNAYLGRIVDLILAGAQPRPPLDERYETDMAEGLKAMALEGHGVAFLPESAVTREVASHRLACAGEAYTETMEIRLYRERAPAGGPAKPLVDALWNYLSGAR*