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scnpilot_p_inoc_scaffold_455_48

Organism: SCNpilot_P_inoc_Burkholderiales_62_9

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: 54224..55921

Top 3 Functional Annotations

Value Algorithm Source
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054};; Alpha-IPM synthase {ECO:0000 similarity UNIPROT
DB: UniProtKB
  • Identity: 71.1
  • Coverage: 568.0
  • Bit_score: 844
  • Evalue 6.70e-242
leuA; 2-isopropylmalate synthase (EC:2.3.3.13) similarity KEGG
DB: KEGG
  • Identity: 70.9
  • Coverage: 567.0
  • Bit_score: 840
  • Evalue 2.50e-241
2-isopropylmalate synthase n=1 Tax=Herbaspirillum seropedicae RepID=UPI0002F3B44C similarity UNIREF
DB: UNIREF100
  • Identity: 71.2
  • Coverage: 566.0
  • Bit_score: 844
  • Evalue 4.80e-242
  • rbh

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Taxonomy

Herbaspirillum frisingense → Herbaspirillum → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1698
ATGTTGAAGAATCCCGAGGCGAAATACCGCCCCTTCCCCGCCTACGACTTTTCCGAGCGTAGCTGGCCCAACCGCCGCATGACCAAGGCGCCGATCTGGATGAGCACCGATCTGCGCGACGGCAACCAGGCCTTGATCGAGCCCATGAACGGCGAGCGCAAGACGCGCATGTTCGAGAAACTGGTCCAGATCGGATTCAAGGAAATCGAGGTCGGTTTCCCGTCGGCTTCGCAGACGGATTTCGATTTCATCCGCGGCCTGATCGACCAGAACCGGGTGCCCGAGGACGTCACCATCGAGGTGTTGACGCAATCGCGTGAAGAACTCATCCGCCGCACTATCGAGTCGGTCGAAGGCGGCCGCCGGGTGATCGTGCACATGTACAACGCCATCGCGCCGGCCTTCCGCCGCATCGTGTTCGGCATGACGCGCGAAGAGGTCAAGCAGGTCGCGCTGGAAGGGACCCGCCTCATCAAGGAATTGACCGACGCGCGTCCCGATACCGAGTGGGTCTACCAGTACTCGCCCGAGGTATTCAGTTCGTCCGAACTCGATTTCGCCAAGGAAGTGTGCGATGCGGTGGTCGAGGCCTGGGGCGCGACGCCCAACCGCAAGATCATCCTGAATCTCCCCGCCACGGTCGAATGCGCGATGCCCAACATCTACGCCGACCAGATCGAGTGGATGCACCGCAACCTGGCCAACCGCGACAGCATCATCCTCAGCGTCCACCCGCACAACGACCGCGGTACCGCGGTGGCGGCGGCCGAGATGGCCGTGCTGGCCGGCGCCGAGCGCATCGAAGGCTGCCTGTTCGGCCACGGCGAACGCACCGGCAACGTCGACCTGGTCACGTTGGCCTTGAACTGCTACAGCCAGGGCGTTTCGCCGGGGCTCGATTTTTCCGACATCGACGAGGTGCGCCGCTGCGTCGAATACTGCACCCAGTTGCCGGTGCATCCGCGCCATCCCTACGTGGGCGACCTCGTCTTCACCGCATTCTCGGGCTCGCACCAGGACGCGATCAAGAAGGGCTTCGCGCAGCGCCAGCCGGATGCCGTCTGGGACGTTCCCTACCTGCCCATCGACCCGGCCGACCTGGGGCGCAGCTATGACGCCGTCATCCGCGTGAACAGCCAGTCCGGCAAGGGCGGGGTGTCCTACCTGCTGCAACAGGAATACGGCTTCGACTTGCCGCGCCGCCTCCAGATCGAGTTCAGCCGCGCCATCCAGCGCGTGACCGACGAGACCGGCAAGGAGGTCGTGGCGGCCGACGTCTACTCCATCTTCAGCCACGAGTACCTGGAGCAGCACGAGCCCTATCGCTTCGTCCGCCATCGCATGGCTAGCGTCGAAGGCGGCGTGCGGGTCGAGGTCGACGTGCAGGCCGATGGCCAGGTGAGCACCCTGGTGGGTACCGGCAACGGCCCGATCGACGCCTTCGTGCAGGCGCTGAACATGCCGATGCGGATGATGGACTACCACGAGCATTCGATAGGCGTGGGCGCCGACGCGACCGCCGCCTGCTACGTGGAGGTGCGCGTGGGCGATGCCCCCACGGGCTTCGGCGTGGGCGTGGACAGCGACATCGTCACGGCTTCGTTCAAGGCCGTGCTGAGCGCGATCAACCGCCACATCCGCGACAGCGGGCAGCCTGCCGCGACGGCTGGGACGAAGCTTGCGGAAGTGAGTGTGTGA
PROTEIN sequence
Length: 566
MLKNPEAKYRPFPAYDFSERSWPNRRMTKAPIWMSTDLRDGNQALIEPMNGERKTRMFEKLVQIGFKEIEVGFPSASQTDFDFIRGLIDQNRVPEDVTIEVLTQSREELIRRTIESVEGGRRVIVHMYNAIAPAFRRIVFGMTREEVKQVALEGTRLIKELTDARPDTEWVYQYSPEVFSSSELDFAKEVCDAVVEAWGATPNRKIILNLPATVECAMPNIYADQIEWMHRNLANRDSIILSVHPHNDRGTAVAAAEMAVLAGAERIEGCLFGHGERTGNVDLVTLALNCYSQGVSPGLDFSDIDEVRRCVEYCTQLPVHPRHPYVGDLVFTAFSGSHQDAIKKGFAQRQPDAVWDVPYLPIDPADLGRSYDAVIRVNSQSGKGGVSYLLQQEYGFDLPRRLQIEFSRAIQRVTDETGKEVVAADVYSIFSHEYLEQHEPYRFVRHRMASVEGGVRVEVDVQADGQVSTLVGTGNGPIDAFVQALNMPMRMMDYHEHSIGVGADATAACYVEVRVGDAPTGFGVGVDSDIVTASFKAVLSAINRHIRDSGQPAATAGTKLAEVSV*