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scnpilot_p_inoc_scaffold_534_60

Organism: SCNpilot_P_inoc_Burkholderiales_62_9

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: 60330..61259

Top 3 Functional Annotations

Value Algorithm Source
anaerobic benzoate catabolism transcriptional regulator (EC:2.7.1.71); K15546 XRE family transcriptional regulator, aerobic/anaerobic benzoate catabolism transcriptional regulator Tax=RIFCSPLOWO2_02_F similarity UNIPROT
DB: UniProtKB
  • Identity: 75.5
  • Coverage: 282.0
  • Bit_score: 426
  • Evalue 4.10e-116
anaerobic benzoate catabolism transcriptional regulator (EC:2.7.1.71); K15546 XRE family transcriptional regulator, aerobic/anaerobic benzoate catabolism transcriptional regulator id=5082650 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD similarity UNIREF
DB: UNIREF100
  • Identity: 68.4
  • Coverage: 313.0
  • Bit_score: 414
  • Evalue 1.10e-112
putative Shikimate kinase (EC:2.7.1.71) similarity KEGG
DB: KEGG
  • Identity: 69.1
  • Coverage: 304.0
  • Bit_score: 411
  • Evalue 2.70e-112

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Taxonomy

R_Betaproteobacteria_65_24 → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 930
ATGAAAGAAGAGGCAGTTTCCGAAGCGGGGCAGGCCGCGGCCAACGACGTGCCGGCCAAGGAGCCTTTCCTGGTGACGCTGGGGGAACGAATACGGACGCTGCGGGCCCGCCGAGGCGTGACCCGCAAGGCCACGGCCTCGGCCGCCGGGATTTCGGAACGGCACCTTGCCAACCTGGAGCTGGGGACCGGCAACGCCTCCATCCTGATCCTGCTGCAAGTCTCCCAGGCTTTGCAGTGCTCGCTGGCCGAGATACTGGGCGACGTCACCACCACCAGCCCGGAATGGCTGCTGATCCGCGAACTGCTCGAGGGGCGTTCCGAGGCCGACCTGCATCGCGCCCGCAATACGCTGACGGAAATGTTCGGCTCGCGCGAGAACAATCATTCCCGCCTGTCCCGCATCGCCCTGGTCGGGCTGCGGGGGGCGGGCAAGTCCACGCTGGGCCGGATGCTGGCCGAGGACCTGGGCTATACCTTCATCGAACTCAGCAGGGAGATCGAGAAAGTGGCCGGCTGCAGCATCGTCGAGATCCATTCGCTGTATGGCGCCAACGCCTATCGCCGCTATGAGCGGCGGGCGCTGGAGGAAACCGTGCAGATCCACCCCGAGGTCGTGATCGCCACGCCGGGCGGTCTGGTGTCGGACGTCTCGACCTTCAATCTGCTGTTGTCGCACTGCTATACGGTCTGGCTGCAGGCCGACCCCGAGGATCACATGCGCCGGGTCGTGGCCCAGGGCGATTTCCGTCCCATGTCCGGCAGCCGCGAGGCCATGGACGATCTCAAGCGCATCCTGGCTGGCCGGGCCGCGTTCTACGCCAAGGCCGACGCCCGCTACAACACCAGCGGGCATTCGCTGGAAGAGGCATTTGCCGGTTTGCGTTCGCTGGTGCGCAGCGCGGCGGGCATGGTGGACTGGAGTATGTGA
PROTEIN sequence
Length: 310
MKEEAVSEAGQAAANDVPAKEPFLVTLGERIRTLRARRGVTRKATASAAGISERHLANLELGTGNASILILLQVSQALQCSLAEILGDVTTTSPEWLLIRELLEGRSEADLHRARNTLTEMFGSRENNHSRLSRIALVGLRGAGKSTLGRMLAEDLGYTFIELSREIEKVAGCSIVEIHSLYGANAYRRYERRALEETVQIHPEVVIATPGGLVSDVSTFNLLLSHCYTVWLQADPEDHMRRVVAQGDFRPMSGSREAMDDLKRILAGRAAFYAKADARYNTSGHSLEEAFAGLRSLVRSAAGMVDWSM*