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scnpilot_p_inoc_scaffold_476_40

Organism: SCNpilot_P_inoc_Burkholderiales_62_9

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: 36909..37823

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoH n=1 Tax=Alcaligenes xylosoxydans xylosoxydans RepID=O82848_ALCXX similarity UNIREF
DB: UNIREF100
  • Identity: 75.3
  • Coverage: 288.0
  • Bit_score: 430
  • Evalue 1.20e-117
  • rbh
RNA polymerase sigma factor RpoH {ECO:0000256|HAMAP-Rule:MF_00961}; RNA polymerase sigma-32 factor {ECO:0000256|HAMAP-Rule:MF_00961}; TaxID=85698 species="Bacteria; Proteobacteria; Betaproteobacteria; similarity UNIPROT
DB: UniProtKB
  • Identity: 75.3
  • Coverage: 288.0
  • Bit_score: 430
  • Evalue 1.60e-117
rpoH; RNA polymerase factor sigma-32 similarity KEGG
DB: KEGG
  • Identity: 75.3
  • Coverage: 288.0
  • Bit_score: 428
  • Evalue 1.20e-117

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Taxonomy

Achromobacter xylosoxidans → Achromobacter → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 915
ATGAAACGTTCGTCGAATCAGTCCAACGTCCTCGCACCCGCCACAAGCGGTCCGGGCGCGCTGGCCCTGGCCATCGCCAACCCGGGCGCCCTTGGCACGATCGAAGCCTATATCGGCGCCGTCAACCGCCTGCCGGTGCTGACGGCCGAGCAGGAACACGAGCTGGCCCAGCGCTACCAGGAAAAGCAGGACCTCAACGCCGCCCGCGAACTGGTGCTGTCGCACCTGCGCCTGGTGGTCGCCATCGCCCGCCAGTACCTGGGCTATGGGCTGCCGCACGCCGACCTGATCCAGGAAGGCAACGTCGGCCTGATGAAGGCCGTCAAGCGATTCGACCCCAACCGCGGCGTGCGGCTGGTGTCCTTCGCCATCCACTGGGTCAAAGCCGAGATCCACGAGTACATCCTGAAGAACTGGCGCCTGGTCAAGGTGGCCACCACCAAGGCCCAGCGCAAGCTGTTCTTCAACCTGCGCAGCCTGAAGCCGGACTCGCACGCGCTCACGCCGGAACAGGTCGAGGAAATCGCCGCCAGCCTGAACGTGCGGCCGCAGGACGTGACCGAGATGGAAGTGCGCCTGTACGGGCAGGACCTGGCCCTGGAAGGCCGTGGCACCGATGACGGCGAAAACGATTTCGCCCCCATCGCCTACCTGTCGGACGAAGGCCAGCAGGAGCCCAGCGCCATCCTCGAGGAACGCCGCCGCGACGAACTGCACGGCAGCGGACTCCTGCAGGCCCTGGAAAGCCTGGACGAACGGTCGCGTCGCATCATCGAGGCGCGCTGGCTGAAGGACGAGGGCGGCGCCACGCTGCAGGAACTCGCGAACGAGTTCGGCGTGTCCGCCGAGCGCATCCGCCAGATCGAGGCGCGCGCCATGACCAAGATGCGCGGCGCGCTGGCCGAGTACGCCTGA
PROTEIN sequence
Length: 305
MKRSSNQSNVLAPATSGPGALALAIANPGALGTIEAYIGAVNRLPVLTAEQEHELAQRYQEKQDLNAARELVLSHLRLVVAIARQYLGYGLPHADLIQEGNVGLMKAVKRFDPNRGVRLVSFAIHWVKAEIHEYILKNWRLVKVATTKAQRKLFFNLRSLKPDSHALTPEQVEEIAASLNVRPQDVTEMEVRLYGQDLALEGRGTDDGENDFAPIAYLSDEGQQEPSAILEERRRDELHGSGLLQALESLDERSRRIIEARWLKDEGGATLQELANEFGVSAERIRQIEARAMTKMRGALAEYA*