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scnpilot_p_inoc_scaffold_476_61

Organism: SCNpilot_P_inoc_Burkholderiales_62_9

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: comp(60001..60993)

Top 3 Functional Annotations

Value Algorithm Source
Putative BUG-like extracytoplasmic solute binding receptor, TTT family n=1 Tax=Variovorax paradoxus B4 RepID=T1XF45_VARPD similarity UNIREF
DB: UNIREF100
  • Identity: 58.9
  • Coverage: 302.0
  • Bit_score: 356
  • Evalue 2.30e-95
putative BUG-like extracytoplasmic solute binding receptor, TTT family similarity KEGG
DB: KEGG
  • Identity: 58.9
  • Coverage: 302.0
  • Bit_score: 356
  • Evalue 6.50e-96
Putative BUG-like extracytoplasmic solute binding receptor, TTT family {ECO:0000313|EMBL:AGU51116.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadace similarity UNIPROT
DB: UniProtKB
  • Identity: 58.9
  • Coverage: 302.0
  • Bit_score: 356
  • Evalue 3.20e-95

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 993
ATGCAAGCATCGTTCGTTCGCGCCCGCCGCGTGCTGGGGCAGGGCCTGTTGTTGTCGCCGCTGGTCTGGGGCCTGGGCACACCGGCCTGGGCAGGTGCCTGGCCTACAGGTCCCATCCGGATCGTGGTCAACAATCCTGCGGGAGGCGCGGTCGACGTGGTGGCCCGCCTGGTCGCCACGCCGCTGGCTCAGGTCCTGCACCAACCCGTCATCATCGAGAACCGCGGCGGTGCGAACGGCAATATCGGCGCCGAGGCGGTCGCCCGCGCCGCGCCGGACGGCTATACCCTGCTGGCCAGCGCGGGCGGCGTGTTCGCGGTCAACACGGCGCTGTATCCCAACATGTCCTTCAGCGTCGACCGGGACCTGCAGCCGGTGGCGGGCATCATGCGGGTCTCGGTATTCCTGACCACCAATGCGTCGCTGCCCGTGTCTAGCGTGCGCGAGTTCGTCGAGTGGGGCCGCACGCATCCCGGCAAGCTCTCGTATGGTTCGGCCGGCACCGGCAGTTTGCCGCACCTGGCGGGGGAAATGTTCAACGAAGCGGCGGGTATCCGCTCGCTGCACGTGCCGTACCGGGGCGCAGCGCCGGCATTGGCGGACTTGTTGGGGGGCCAGGTGCAGTACATGTTCGACCCCGGCATCGGCCTGGCCCAGGTGCGCGCGGGCAAGCTCAAGCGGCTGGCCATTGCCGACCTGAAGCGTTCGCCGCTGTTTCCCGAGCTGCCGACCTTGGCCGAATCGGGACTGCCAGGGTTCGAGGCGAACTCGTGGTACGGCATCTATGCTCCGGCTGGCGTACCCGCCGGCATCATCGATCGCCTCAACAAGGAGATCAACAGTATCCTCGAACGGCCGGAAGTCAAGGAGGGGCTGGCGACCCTGGGCGGACAGCCGTTGGCGGTCACGCCCGCGGAGCTGGTGCAGAAGGCGCGCTCCGATAGCGAGCGTTTCGGCGCCGTGATCCGGGCCCGCAACATACGCATCGACTGA
PROTEIN sequence
Length: 331
MQASFVRARRVLGQGLLLSPLVWGLGTPAWAGAWPTGPIRIVVNNPAGGAVDVVARLVATPLAQVLHQPVIIENRGGANGNIGAEAVARAAPDGYTLLASAGGVFAVNTALYPNMSFSVDRDLQPVAGIMRVSVFLTTNASLPVSSVREFVEWGRTHPGKLSYGSAGTGSLPHLAGEMFNEAAGIRSLHVPYRGAAPALADLLGGQVQYMFDPGIGLAQVRAGKLKRLAIADLKRSPLFPELPTLAESGLPGFEANSWYGIYAPAGVPAGIIDRLNKEINSILERPEVKEGLATLGGQPLAVTPAELVQKARSDSERFGAVIRARNIRID*