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scnpilot_p_inoc_scaffold_547_29

Organism: SCNpilot_P_inoc_Burkholderiales_62_9

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: 32095..32985

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00035DD133 similarity UNIREF
DB: UNIREF100
  • Identity: 41.3
  • Coverage: 288.0
  • Bit_score: 203
  • Evalue 2.20e-49
D-alanyl-D-alanine endopeptidase {ECO:0000313|EMBL:KGG85579.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testost similarity UNIPROT
DB: UniProtKB
  • Identity: 40.5
  • Coverage: 296.0
  • Bit_score: 225
  • Evalue 1.30e-55
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 41.4
  • Coverage: 290.0
  • Bit_score: 203
  • Evalue 1.10e-49

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Taxonomy

Comamonas testosteroni → Comamonas → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 891
ATGGAAATTCGGCATCTCCGGTATTTCTTGGCTCTGGCTGAGGAACTGCATTTTGGAAGAGCTGCAGCGCGCGCTCATATCGAACAGTCCCCATTGTCACGCAGCATCACGCAATTGGAACAGGAACTGGGGGTACCACTATTCATTCGATCCCGGCAAGGTACGAGCCTGACGCCAGCTGGCGAAGCATTGCGTGACCATGCCCGCGACATACTGACCGGCGTCGAACGAGCTCGACGCGCCGTCGCACGCATTGGCGGTCAGCCCAATGCGTTGCGTATCGGCTTATCAGAGGGGCTTGCCCAACCGCGCCTGTCAGAGCTTTTTCAATGCTGGCATAGAAAGTATCCCGACATGCAATTGCGGATCAGCGAGCTACCATCCCTTCAGCAGCAAGAGGCATTACTGACCGAGCGCATTGACATGGGCCTTTCGTTTGGGGCGGCTCAGGAGGAAGGTCTGATCGTAGAGCCGCTTTGGGCCGATCGCATCATGGCTGCGATTCCTCGCGCACATCCGCTGGCACAGACTAAATCGTTGACACTGGCATCGGCAGCAGCATCCTGCTCTCTGGTTTTTTGCCACACGCGTTTGAAGCCGGGTCTACGGATGCAGATCGAAGCGCTATTGCGAGCCAGAGGAATTTCGCCGATATTGGCCGAGCCAGTCGACACCTTGGCCGGAATGATAGTGAAAGTGGGCGCTGGCTGCGGCATCGCCTTCCTGGATGCCAACCACGCAAGGACGCTGCAGCGCCCGGATGTCGCAATCGTACCGCTAGTCGATTCGGATGCGTGGCTAACCATCTTCGCGATCACTAAGGATGGGCGGCAGGACGATCTGTCGGCAGCGATGGCGCGGTTTGTGATGCTGGGCCGTAATATGGTCTAG
PROTEIN sequence
Length: 297
MEIRHLRYFLALAEELHFGRAAARAHIEQSPLSRSITQLEQELGVPLFIRSRQGTSLTPAGEALRDHARDILTGVERARRAVARIGGQPNALRIGLSEGLAQPRLSELFQCWHRKYPDMQLRISELPSLQQQEALLTERIDMGLSFGAAQEEGLIVEPLWADRIMAAIPRAHPLAQTKSLTLASAAASCSLVFCHTRLKPGLRMQIEALLRARGISPILAEPVDTLAGMIVKVGAGCGIAFLDANHARTLQRPDVAIVPLVDSDAWLTIFAITKDGRQDDLSAAMARFVMLGRNMV*