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scnpilot_p_inoc_scaffold_593_1

Organism: SCNpilot_P_inoc_Burkholderiales_62_9

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: comp(3..926)

Top 3 Functional Annotations

Value Algorithm Source
Putative uncharacterized protein (Fragment) n=1 Tax=Ricinus communis RepID=B9TD33_RICCO similarity UNIREF
DB: UNIREF100
  • Identity: 44.4
  • Coverage: 333.0
  • Bit_score: 250
  • Evalue 2.20e-63
RHS Repeat family protein {ECO:0000313|EMBL:KGB98446.1}; TaxID=292 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex. similarity UNIPROT
DB: UniProtKB
  • Identity: 46.6
  • Coverage: 320.0
  • Bit_score: 266
  • Evalue 4.10e-68
lysM domain protein similarity KEGG
DB: KEGG
  • Identity: 42.2
  • Coverage: 334.0
  • Bit_score: 234
  • Evalue 4.60e-59

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Taxonomy

Burkholderia cepacia → Burkholderia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 924
ATGGTAGCGATCGTCACGGGTAGCGGGTTGGGCGTCCAGGCAGGGTCGGGGCTGGTGCTGGGTGGGCTGGGGCAGCTCGGCCAGGCGCAGCTCGGTCGAGGGCGGGACCAGGCCTATGTGAACGCGGCCAACGGCAACCTCGTGATCGGGGCGCAGGACCAGTGGCTGGTGGGCCAGGGGCCGGATGCGGCGGTGTACCGCGCCTATAACAGCCAGGGCACGGGGGCGGGCACCAATTGGCAGACCGGCGATACCCGGCGCATTACCGGCCTGACCGGCACGGTCAACACGGCGGGCAGCACCGTCAAACGCGTGGACTGGGACGGAACGGAAACCCTCTACCGCTACGTCGTCGCCCGTCAGCGCTATGAAACCAGTGATGGGGCCGGTGCGTACGATGTACTCGTGTTCACCGCTGCGGACCAGCGTTGGACCTGGACGCAGGGCACCGGCCGCCAGAGCGAGGTTTATGACAATGCGCAGGCCGGCCGGATTATTTCCGGCCAGGATGCCGACGGGAACGTCCGCAGCTATGTCTATAACACCAAAGGGCTGTTGGCGGAGGTGCGCACGCAGGGCGGCGAGAAGACGCTGCTGGTCTACGATGCGAGCGATCGGCTGATCCAGCTGAAAACCGTGGCCAAGGGCGCCGACAACGTGACCGATGTCACGACCCTGCAGGTTACCTACAGCTATGGCAGCACGACGGACAAGCGGATCAGCAAGGTGAGTGTATCCGTCGGGCCGAGTACGAAGGTCTACGACACGACTTATACCTACGTCGGCACGAGCAACCAGATCGAGTCCATCACGACCACGGGGGGCGGCAAGGTCTCGTTCACCTACGATGCCTCGAACCGGGTCAAGACCATCGTGCAATGGGATGGCACGGCCAGCCGGACCACGACGCTGACCTACGCGGCG
PROTEIN sequence
Length: 308
MVAIVTGSGLGVQAGSGLVLGGLGQLGQAQLGRGRDQAYVNAANGNLVIGAQDQWLVGQGPDAAVYRAYNSQGTGAGTNWQTGDTRRITGLTGTVNTAGSTVKRVDWDGTETLYRYVVARQRYETSDGAGAYDVLVFTAADQRWTWTQGTGRQSEVYDNAQAGRIISGQDADGNVRSYVYNTKGLLAEVRTQGGEKTLLVYDASDRLIQLKTVAKGADNVTDVTTLQVTYSYGSTTDKRISKVSVSVGPSTKVYDTTYTYVGTSNQIESITTTGGGKVSFTYDASNRVKTIVQWDGTASRTTTLTYAA