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scnpilot_p_inoc_scaffold_593_4

Organism: SCNpilot_P_inoc_Burkholderiales_62_9

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: 2617..3372

Top 3 Functional Annotations

Value Algorithm Source
Type III secretion system inner membrane R protein n=1 Tax=Burkholderia ambifaria MEX-5 RepID=B1T8E1_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 48.4
  • Coverage: 250.0
  • Bit_score: 232
  • Evalue 3.80e-58
Type III secretion system inner membrane R protein {ECO:0000313|EMBL:EDT40180.1}; TaxID=396597 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; B similarity UNIPROT
DB: UniProtKB
  • Identity: 48.0
  • Coverage: 250.0
  • Bit_score: 231
  • Evalue 1.20e-57
bacterial export s, 1 family protein similarity KEGG
DB: KEGG
  • Identity: 46.3
  • Coverage: 244.0
  • Bit_score: 223
  • Evalue 8.60e-56

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Taxonomy

Burkholderia ambifaria → Burkholderia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 756
TTGGCCATCGAATCGTCCGCAGCCTGGTTGGCCGCCGTCCTGCTGCTGACGGTGCGGATCGGACCGGTTCTGGCATTCGCCCCGCCATTCACCCTGCTCCGGATTCCCGCCCGGATCCGTGTCCTGGCATCGATAGGGTTTGCCGCCAGCCTGGCTCCATCCGGCCTCGGCGCCATTCCGACCCTGCCCCGCCTGGTCGCCATGGCCGGGGCGGAACTGTTCATCGGCATGGTCGTTGCATTCTCATTGCAGGCCGCGTTTTCCTCTTTCTATTTTGTCGGCCGGGTCGTGGATGTCCAGGCGGGGTTTGGCCTGGCGATGGTCATCGACCCCGCCACCCGCACACAAAGCCCGCTGCTGGGATCGATCTTCGCGTTGGGCGCTGGCATGGTTTTCTTTGCCTCCAACGGGCATCATGACTTGCTGCGGCTGCTGGCCAGCCTGGTCGAGGTGCTCCCCCCCGGGGCCCCATTCACCGCCCCCGAACCGGACGCGCTGATTTCCTATTTCAGCACGGTCTTCTCCATGGGCCTGGCCTTGGGGGTCGTCGTCATGTCGGCGCTGTTCCTCGTCGATATCGCCATCGGCTTTCTGTCCAGAACCATGCCGCAGATGAACATGCTGGTCCTGGGCTTCCAGGTCAAGACGCTCATCGTCCTGCTCGGCCTGGCCGCGACCGTGGGGCTGATGGCCCCGGCCATGCTGAAGGTCCTGCGCGCCGCGCTCGAGTTTCCCGCTTTCTGGTTGTCGCCATGA
PROTEIN sequence
Length: 252
LAIESSAAWLAAVLLLTVRIGPVLAFAPPFTLLRIPARIRVLASIGFAASLAPSGLGAIPTLPRLVAMAGAELFIGMVVAFSLQAAFSSFYFVGRVVDVQAGFGLAMVIDPATRTQSPLLGSIFALGAGMVFFASNGHHDLLRLLASLVEVLPPGAPFTAPEPDALISYFSTVFSMGLALGVVVMSALFLVDIAIGFLSRTMPQMNMLVLGFQVKTLIVLLGLAATVGLMAPAMLKVLRAALEFPAFWLSP*