ggKbase home page

scnpilot_p_inoc_scaffold_593_27

Organism: SCNpilot_P_inoc_Burkholderiales_62_9

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: 20062..20832

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma 28 subunit, FliA/WhiG family n=1 Tax=Burkholderia ambifaria MEX-5 RepID=B1TBB4_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 43.8
  • Coverage: 249.0
  • Bit_score: 198
  • Evalue 1.10e-47
RNA polymerase sigma factor, sigma-70 family protein similarity KEGG
DB: KEGG
  • Identity: 47.4
  • Coverage: 247.0
  • Bit_score: 210
  • Evalue 5.80e-52
RNA polymerase sigma factor, sigma-70 family protein {ECO:0000313|EMBL:AJX14833.1}; TaxID=1249668 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia similarity UNIPROT
DB: UniProtKB
  • Identity: 47.4
  • Coverage: 247.0
  • Bit_score: 210
  • Evalue 2.90e-51

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Burkholderia ubonensis → Burkholderia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 771
ATGAACTCCCTGCCCTCGGACGCCGACGCGCCTGCCCCTCCCGACGAGACTCCGGCCACGGAGGCCGGCCTCTGGCAGGCGTTTCATTTCTCCCGGTCGTCCGAGGCCCGGGAAGCCGTTTTCCTGCACTACCTTGCCCACGCGAAAACCATTACCGCACGCGTCTACGCCAGGCGCCAGTACGACGACATCGACTTCCAGGATCTGTATCAACTGGGCTGCATCGGCCTCCTGGAAGCCATCGACGTCTTCGACCCGCACCGGGAAGCCTCCTTCAGGACATTCAGCTTCGCCCGTATCGAGGGCAATATCCTGAGCGGCATCGCCCGCCTTACGGACGGCCAGGAGCAAGTTTTTCTCCGGTCACGAATCAAGAAGGACCGCCTCGCCTCCCTGAAGGACCCGGCGGCGGGCTCATCGAAAAAGGATGCGTTCTCGCAGCTTTGCGACGTGGCGACCGGCATGGCGATCGGGTTCATGCTCGAGGACACCAGGATGTGGGTTTCCTCCGACGCCGCGCAGGGCGACATGAATGCCTATCGCACGGCGGCCTGGAAGCAAAGCCAGGACAAGCTCCGTACCCAGGTCGACCGATTGCCGGCCAATGAGAAACGCGTCATCCTGTATCACTACTACTACGGGCTGGCGTTCGAGAGCATTGCCGCCGCCATGGGGCTGTCCAAAGGACGGATCTCCCAACTCCACCGCAGCGCCCTGAACGGGCTGAAAAAGGGCCTCCCGCCCTCCGCCGCGCTATCCATTACCCGATAA
PROTEIN sequence
Length: 257
MNSLPSDADAPAPPDETPATEAGLWQAFHFSRSSEAREAVFLHYLAHAKTITARVYARRQYDDIDFQDLYQLGCIGLLEAIDVFDPHREASFRTFSFARIEGNILSGIARLTDGQEQVFLRSRIKKDRLASLKDPAAGSSKKDAFSQLCDVATGMAIGFMLEDTRMWVSSDAAQGDMNAYRTAAWKQSQDKLRTQVDRLPANEKRVILYHYYYGLAFESIAAAMGLSKGRISQLHRSALNGLKKGLPPSAALSITR*