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scnpilot_p_inoc_scaffold_1929_4

Organism: SCNpilot_P_inoc_Burkholderiales_62_9

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: comp(4003..5103)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Nevskia ramosa RepID=UPI0003B75D6F similarity UNIREF
DB: UNIREF100
  • Identity: 49.9
  • Coverage: 363.0
  • Bit_score: 342
  • Evalue 6.50e-91
Uncharacterized protein {ECO:0000313|EMBL:AKH20131.1}; TaxID=1543721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Sedimenticola.;" source="Sedimenticola sp. SIP-G1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.0
  • Coverage: 353.0
  • Bit_score: 347
  • Evalue 2.20e-92
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 47.3
  • Coverage: 334.0
  • Bit_score: 322
  • Evalue 1.50e-85

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Taxonomy

Sedimenticola sp. SIP-G1 → Sedimenticola → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1101
ATGAAGATAGAAATACGTCCTCATCTCTATCTGGTCGATGACGATGACCACGCCTCGTCGCTGGTGCGCGGGGTGCAATTGCTGTCCGCCATCGAGGCCACCGGCAATCTGCGGGCGGCCAGCGGGACCCTGGCGCTGTCCTATCGCCATGCGTGGAATGCCCTGGCCGAGATGGAAGGCCGGCTGGGCGGTCCGGTCGTCGCCATGACCCGGGGCCGGGGCGCCGAGCTGACCGAGCTCGGACGCCGGCTGGTGGCCGCGCAGCGGCTCATCCATGCCAGGGTGGATCCGCTGTTCGACAGCATGGCCACCGAGATCGAGGCGGAAATCCGTTCCGCCGTCTCGCAAGAAAGCAACGTGCTGAAGATCCACGCCAGCCACGGGTTCGCCATCGAGGCCCTGAACCGCCACGCGCATCGCAAGGGCATCCTGCTGGACATGAATTATCGCGGCAGCGTCGAGGCCCTGAATGCGTTCAACCGCGGCAATTGCGACATCGCCGGCTTCCACGTGCCCATGGGGGCGCTGGAGTTGCCCGTGCTGGAGCAGTTCTCCGCGCTGCTGCACCGCGACCACCGCATCGTCGCCCTGGCCACGCGCCGCCAGGGGATCATGGTGGCCAAGGGCAACCCCAGGAATATCTGGTGCATCGAGGACCTCGCCCATCCGGACGTGCAGTTCGTCAACCGCCAGCACGGCTCGGGCACGCGCGCCATCCTCGATCTGCTGCTGGAGCAGGCGGGCAAGTCGGGGCGCGACATCAACGGCTACGAGAACATCGAGCTCACCCATGCCGCCATCGCTGCCTACGTGCTGTGCGGCAAGGCCGACGCGGGGCTGGGCGTCGAGACCGCGGCGCGGCGCTTCGACCTGGACTTCGTGCCGCTGCTGACCGAGCGCTACCTGTTCGTGTGCGGGAAGAAGCTGCTGGCCGATCCGCGCTTCCTGCCGCTGAAGGAACTGATGCAAAGCAGCGAGTTCAGGATGGAGATCAATCGCCTGCCAGGCTACGACGCCGTGGACACGGGGATGGTGTCGACCATGCGCGAGGCGTTTCCCCGCTTCTTCCGGCAGCCTGGCCGGAAGGGCGGAGAAGGATAG
PROTEIN sequence
Length: 367
MKIEIRPHLYLVDDDDHASSLVRGVQLLSAIEATGNLRAASGTLALSYRHAWNALAEMEGRLGGPVVAMTRGRGAELTELGRRLVAAQRLIHARVDPLFDSMATEIEAEIRSAVSQESNVLKIHASHGFAIEALNRHAHRKGILLDMNYRGSVEALNAFNRGNCDIAGFHVPMGALELPVLEQFSALLHRDHRIVALATRRQGIMVAKGNPRNIWCIEDLAHPDVQFVNRQHGSGTRAILDLLLEQAGKSGRDINGYENIELTHAAIAAYVLCGKADAGLGVETAARRFDLDFVPLLTERYLFVCGKKLLADPRFLPLKELMQSSEFRMEINRLPGYDAVDTGMVSTMREAFPRFFRQPGRKGGEG*