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scnpilot_p_inoc_scaffold_3021_5

Organism: SCNpilot_P_inoc_Burkholderiales_62_9

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: comp(4485..4754)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, XRE family n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WQR8_COMTE similarity UNIREF
DB: UNIREF100
  • Identity: 69.4
  • Coverage: 72.0
  • Bit_score: 102
  • Evalue 2.10e-19
Variovorax paradoxus strain MEDvA23 contig_84, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ21942.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona similarity UNIPROT
DB: UniProtKB
  • Identity: 67.9
  • Coverage: 81.0
  • Bit_score: 114
  • Evalue 5.80e-23
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 45.8
  • Coverage: 83.0
  • Bit_score: 80
  • Evalue 3.20e-13

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 270
ATGCCAAATGATGCGCGCATGACCACATACAAGCCATCGACCGACAAGAACCCGCTATTCACCACCTTTGGGGAGGTCGTGCGTCGACGGCGCAAGGCGTTGGGCTACTCGCAGGAAGCCTTTGGCGACGCCTGCGGGATAGACCGCAGCTACATGGGCCGCATCGAGCGCGGCGAGCACAACCCGACCTTGGCCAGCATCATGAAGATCATCGAGACGCTGGGTGTCCAGCCCTCCGAGTTCTTCCGGGACTTCGACACGCGGCCCTAA
PROTEIN sequence
Length: 90
MPNDARMTTYKPSTDKNPLFTTFGEVVRRRRKALGYSQEAFGDACGIDRSYMGRIERGEHNPTLASIMKIIETLGVQPSEFFRDFDTRP*