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scnpilot_p_inoc_scaffold_1107_13

Organism: SCNpilot_P_inoc_Burkholderiales_66_5

near complete RP 49 / 55 MC: 1 BSCG 48 / 51 MC: 2 ASCG 11 / 38
Location: 9098..9670

Top 3 Functional Annotations

Value Algorithm Source
dtdp-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13) similarity KEGG
DB: KEGG
  • Identity: 79.4
  • Coverage: 180.0
  • Bit_score: 295
  • Evalue 1.30e-77
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TY14_ALIDB similarity UNIREF
DB: UNIREF100
  • Identity: 79.4
  • Coverage: 180.0
  • Bit_score: 295
  • Evalue 4.80e-77
dTDP-4-dehydrorhamnose 3,5-epimerase RmlC {ECO:0000313|EMBL:GAO22210.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source= similarity UNIPROT
DB: UniProtKB
  • Identity: 79.4
  • Coverage: 180.0
  • Bit_score: 295
  • Evalue 6.70e-77

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Taxonomy

Alicycliphilus sp. B1 → Alicycliphilus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 573
ATGCACATCACCCCCACCGCCATCCCCGACGTCCTCTTGATCGCCCCCAGGGTCTTCGGCGACGCACGCGGCTTCTTCTACGAGAGCTTCAACCAGCAGGCCTTCGACGAAGCCACCGGCACCCGCCACCAGTTCGTGCAGGACAACCACAGCCGCTCCAGCCGCGGCGTGCTGCGCGGCCTGCACTACCAGCTGCCGCCGCACGCCCAGGGCAAGCTGGTGCGCGTGGTGCGCGGCAGCGTCTGGGATGTGGCCGTCGATATCCGCCAGGGTTCCCCCACCTTCGGCCGGTGGGTGGGCGAGGAGCTGTCCGAGGACAACCAGCGCCAGCTCTGGATTCCGCCCGGCCTCGCGCATGGTTTCCTGGTGCTCAGCGACAGCGCCGATTTCCTCTACAAGACCACCGCCTACTACCAGCCGCAGGCCGAGCGCTGCATCGCCTGGAACGATGCGCAGCTGGCCATCCGCTGGCCTGAAGGCATCACCCCCCTGCTCTCGGCCAAGGATGCGCAGGGCCTGCCCTTGGCGCGGGCCGAGCTTTCCCCCTCTCCGCCTGGGAGAGGGCAGGGGTGA
PROTEIN sequence
Length: 191
MHITPTAIPDVLLIAPRVFGDARGFFYESFNQQAFDEATGTRHQFVQDNHSRSSRGVLRGLHYQLPPHAQGKLVRVVRGSVWDVAVDIRQGSPTFGRWVGEELSEDNQRQLWIPPGLAHGFLVLSDSADFLYKTTAYYQPQAERCIAWNDAQLAIRWPEGITPLLSAKDAQGLPLARAELSPSPPGRGQG*