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scnpilot_p_inoc_scaffold_1512

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1512_1
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..175)
DNA (174bp) protein (58aa)
oxidoreductase n=1 Tax=Rhizobium leguminosarum RepID=UPI00037F5CFE
Oxidoreductase {ECO:0000313|EMBL:KKC32848.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
GFO/IDH/MocA family dehydrogenase
scnpilot_p_inoc_scaffold_1512_2
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

340..1377
DNA (1038bp) protein (346aa)
HTH-type transcriptional regulator AglR n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3X1Q0_RHIFR rbh
LacI family transcriptional regulator {ECO:0000313|EMBL:KKB08031.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chi
aglR2; HTH-type transcriptional regulator AglR
scnpilot_p_inoc_scaffold_1512_3
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1945..2742)
DNA (798bp) protein (266aa)
ABC transporter related protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFG3_PELHB rbh
ABC transporter {ECO:0000313|EMBL:KKB77714.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
ABC transporter
scnpilot_p_inoc_scaffold_1512_4
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2735..3775)
DNA (1041bp) protein (347aa)
Transport system permease protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11M35_MESSB rbh
Iron ABC transporter permease {ECO:0000313|EMBL:KFL32052.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.
transport system permease
scnpilot_p_inoc_scaffold_1512_5
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3772..4794)
DNA (1023bp) protein (341aa)
Transport system permease protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFG5_PELHB rbh
ABC transporter permease {ECO:0000313|EMBL:KFL32051.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
transport system permease
scnpilot_p_inoc_scaffold_1512_6
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4894..5805
DNA (912bp) protein (304aa)
ABC-type Fe3+-siderophore transport system, periplasmic iron-binding component n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFG6_PELHB rbh
Iron siderophore-binding protein {ECO:0000313|EMBL:KFL32050.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavi
ABC-type Fe3+-siderophore transport system, periplasmic iron-binding component
scnpilot_p_inoc_scaffold_1512_7
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5858..6778
DNA (921bp) protein (307aa)
ABC-type Fe3+-siderophore transport system, periplasmic iron-binding component n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFG6_PELHB
Iron siderophore-binding protein {ECO:0000313|EMBL:KFL32049.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavi
iron-siderophore ABC transporter substrate-binding protein
scnpilot_p_inoc_scaffold_1512_8
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7208..7414
DNA (207bp) protein (69aa)
'Cold-shock' DNA-binding domain, putative n=1 Tax=Rhodobacterales bacterium Y4I RepID=B6BF15_9RHOB
Cold-shock protein {ECO:0000313|EMBL:KKB80460.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
cold-shock family protein
scnpilot_p_inoc_scaffold_1512_9
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7509..7763
DNA (255bp) protein (85aa)
Uncharacterized protein {ECO:0000313|EMBL:KKB80058.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
scnpilot_p_inoc_scaffold_1512_10
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8007..8261
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R802_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB10155.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1512_11
unknown

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comp(8343..8471)
DNA (129bp) protein (43aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1512_12
unknown

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8530..8880
DNA (351bp) protein (117aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1512_13
unknown

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8915..9310
DNA (396bp) protein (132aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1512_14
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9380..9742
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NN90_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS31787.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC
two component, response regulator
scnpilot_p_inoc_scaffold_1512_15
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9790..10269
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P036_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:KKC32960.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
transcriptional regulator
scnpilot_p_inoc_scaffold_1512_16
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10266..10709)
DNA (444bp) protein (148aa)
hypothetical protein n=1 Tax=Martelella mediterranea RepID=UPI00036D0758
Dehydratase {ECO:0000313|EMBL:KFL25845.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
dehydratase
scnpilot_p_inoc_scaffold_1512_17
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10709..11833)
DNA (1125bp) protein (375aa)
UPI0003CEDCD3 related cluster n=1 Tax=unknown RepID=UPI0003CEDCD3
INTEGRAL MEMBRANE PROTEIN (Rhomboid family) {ECO:0000313|EMBL:CDP53841.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devo
family 1 extracellular solute-binding protein
scnpilot_p_inoc_scaffold_1512_18
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11830..12981)
DNA (1152bp) protein (384aa)
L-carnitine dehydratase/bile acid-inducible protei n F {ECO:0000313|EMBL:CDP53842.1}; EC=2.8.3.16 {ECO:0000313|EMBL:CDP53842.1};; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria;
acyl-CoA transferase n=1 Tax=Martelella mediterranea RepID=UPI000379DB38 rbh
acyl-CoA transferase
scnpilot_p_inoc_scaffold_1512_19
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13430..13990)
DNA (561bp) protein (187aa)
Aldehyde dehydrogenase , PaaZ {ECO:0000313|EMBL:CDP53843.1}; EC=1.2.1.3 {ECO:0000313|EMBL:CDP53843.1};; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobia
Amine oxidase protein n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JAX4_AGRRK rbh
amine oxidase
scnpilot_p_inoc_scaffold_1512_20
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14621..15685)
DNA (1065bp) protein (355aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036AB0E4 rbh
Oxidoreductase, Gfo/Idh/MocA family {ECO:0000313|EMBL:CDP53844.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp.
oxidoreductase
scnpilot_p_inoc_scaffold_1512_21
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15817..16146)
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5ESI0_9RHIZ
L-rhamnose mutarotase {ECO:0000313|EMBL:CDP53845.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1512_22
Devosia epidermidihirudinis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16231..17055)
DNA (825bp) protein (275aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000373A777 rbh
Amidohydrolase {ECO:0000313|EMBL:KKC38224.1}; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia epidermidihirudinis.;"
amidohydrolase
scnpilot_p_inoc_scaffold_1512_23
Devosia epidermidihirudinis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17101..17871)
DNA (771bp) protein (257aa)
hypothetical protein n=1 Tax=Martelella mediterranea RepID=UPI00037B89B8 rbh
IclR family transcriptional regulator {ECO:0000313|EMBL:KKC38225.1}; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia ep
IclR family transcriptional regulator
scnpilot_p_inoc_scaffold_1512_24
Martelella endophytica, Martelella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18097..19425
DNA (1329bp) protein (443aa)
hypothetical protein n=1 Tax=Martelella mediterranea RepID=UPI00037E5CEB rbh
sugar ABC transporter substrate-binding protein rbh
Sugar ABC transporter substrate-binding protein {ECO:0000313|EMBL:AJY44807.1}; TaxID=1486262 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Martelella.;" sourc
Displaying 24 items

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